Gene name: UBC7
Reference locus (S288C): YMR022W
Gene biotype: protein_coding
Description: Ubiquitin-conjugating enzyme E2 7; Ubiquitin conjugating enzyme; involved in the ER-associated protein degradation (ERAD) pathway and in the inner nuclear membrane-associated degradation (INMAD) pathway; requires Cue1p for recruitment to the ER membrane; proposed to be involved in chromatin assembly
Top 10 interactors (score): CUE1 (0.999); HRD1 (0.999); UBX2 (0.999); SSM4 (0.999); HRD3 (0.997); DER1 (0.993); NPL4 (0.992); CDC48 (0.991); UFD1 (0.988); UBA1 (0.986); UBC6 (0.984); HRT1 (0.981); USA1 (0.973); YOS9 (0.963); HMG2 (0.928); UBI4 (0.911); ASI1 (0.871); SEC61 (0.86); MNL1 (0.845); IRE1 (0.816)
Homologues (species, bitscore): UBE2G2 (Homo sapiens, 210.3); Ube2g2 (Mus musculus, 210.3); ube2g2 (Danio rerio, 212.2); ube2g2 (Xenopus tropicalis, 209.1); Ubc7 (Drosophila melanogaster, 209.9); ubc-14 (Caenorhabditis elegans, 203.0); UBC7 (Arabidopsis thaliana, 175.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:368287-368784:+ | gene-YMR022W_AKU4011 | rna-NM_001182518.1_AKU4011 | cds-NP_013735.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:174073-174570:- | gene-YMR022W_BG1 | rna-NM_001182518.1_BG1 | cds-NP_013735.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:308225-308722:+ | gene-YMR022W_Bruggeman | rna-NM_001182518.1_Bruggeman | cds-NP_013735.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:310739-311236:+ | gene-YMR022W_CAT1 | rna-NM_001182518.1_CAT1 | cds-NP_013735.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:301226-301723:+ | gene-YMR022W_CBS1585 | rna-NM_001182518.1_CBS1585 | cds-NP_013735.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:306769-307266:+ | gene-YMR022W_CBS436 | rna-NM_001182518.1_CBS436 | cds-NP_013735.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:414630-415127:+ | gene-YMR022W_CBS6412 | rna-NM_001182518.1_CBS6412 | cds-NP_013735.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:300484-300981:+ | gene-YMR022W_CBS6413 | rna-NM_001182518.1_CBS6413 | cds-NP_013735.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:313411-313908:+ | gene-YMR022W_CENPK1137D | rna-NM_001182518.1_CENPK1137D | cds-NP_013735.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:301058-301555:+ | gene-YMR022W_EthanolRed | rna-NM_001182518.1_EthanolRed | cds-NP_013735.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:304241-304738:+ | gene-YMR022W_FaliES1 | rna-NM_001182518.1_FaliES1 | cds-NP_013735.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:132204-132701:- | gene-YMR022W_JAY291 | rna-NM_001182518.1_JAY291 | cds-NP_013735.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:306186-306683:+ | gene-YMR022W_MUCL30387 | rna-NM_001182518.1_MUCL30387 | cds-NP_013735.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:310611-311108:+ | gene-YMR022W_MUCL30388 | rna-NM_001182518.1_MUCL30388 | cds-NP_013735.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:301511-302008:+ | gene-YMR022W_MUCL39482 | rna-NM_001182518.1_MUCL39482 | cds-NP_013735.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:307326-307823:+ | gene-YMR022W_MUCL42920 | rna-NM_001182518.1_MUCL42920 | cds-NP_013735.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:318634-319131:+ | gene-YMR022W_NCIM3186 | rna-NM_001182518.1_NCIM3186 | cds-NP_013735.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:301428-301925:+ | gene-YMR022W_NCYC1407 | rna-NM_001182518.1_NCYC1407 | cds-NP_013735.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:307371-307868:+ | gene-YMR022W_PE2H3 | rna-NM_001182518.1_PE2H3 | cds-NP_013735.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:313466-313963:+ | gene-YMR022W_PE2H4 | rna-NM_001182518.1_PE2H4 | cds-NP_013735.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:318680-319177:+ | gene-YMR022W_S288C | rna-NM_001182518.1_S288C | cds-NP_013735.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:219089-219586:- | gene-YMR022W_SA1 | rna-NM_001182518.1_SA1 | cds-NP_013735.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:301310-301807:+ | gene-YMR022W_ThermosaccDry | rna-NM_001182518.1_ThermosaccDry | cds-NP_013735.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:305259-305756:+ | gene-YMR022W_VR1 | rna-NM_001182518.1_VR1 | cds-NP_013735.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:280325-280822:+ | gene-YMR022W_ZTW1 | rna-NM_001182518.1_ZTW1 | cds-NP_013735.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:314110-314607:+ | gene-YMR022W_Sparadoxus | rna-NM_001182518.1_Sparadoxus | cds-NP_013735.1_Sparadoxus | 93.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |