Gene name: UBA1
Reference locus (S288C): YKL210W
Gene biotype: protein_coding
Description: Ubiquitin activating enzyme (E1); involved in ubiquitin-mediated protein degradation and essential for viability; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): UBC1 (0.999); RAD6 (0.999); UBC4 (0.999); CDC34 (0.999); UBI4 (0.999); RPL40B (0.998); RPS31 (0.998); UBC13 (0.998); UBC11 (0.998); UBC5 (0.997); RPL40A (0.996); UBC7 (0.986); UBC12 (0.977); SMT3 (0.975); YUH1 (0.97); URM1 (0.968); CDC48 (0.956); RAD23 (0.948); RUB1 (0.946); UBC9 (0.944)
Homologues (species, bitscore): UBA1 (Homo sapiens, 1094.7); Uba1 (Mus musculus, 1094.0); uba1 (Danio rerio, 1065.8); uba1 (Xenopus tropicalis, 751.1); Uba1 (Drosophila melanogaster, 994.6); uba-1 (Caenorhabditis elegans, 788.5); UBA2 (Arabidopsis thaliana, 879.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:24990-28064:+ | gene-YKL210W_AKU4011 | rna-NM_001179775.1_AKU4011 | cds-NP_012712.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:2573-5647:+ | gene-YKL210W_BG1 | rna-NM_001179775.1_BG1 | cds-NP_012712.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:43149-46223:+ | gene-YKL210W_Bruggeman | rna-NM_001179775.1_Bruggeman | cds-NP_012712.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:37847-40921:+ | gene-YKL210W_CAT1 | rna-NM_001179775.1_CAT1 | cds-NP_012712.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:37000-40074:+ | gene-YKL210W_CBS1585 | rna-NM_001179775.1_CBS1585 | cds-NP_012712.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:36688-39762:+ | gene-YKL210W_CBS436 | rna-NM_001179775.1_CBS436 | cds-NP_012712.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:22788-25862:+ | gene-YKL210W_CBS6412 | rna-NM_001179775.1_CBS6412 | cds-NP_012712.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:37637-40711:+ | gene-YKL210W_CBS6413 | rna-NM_001179775.1_CBS6413 | cds-NP_012712.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:38941-42015:+ | gene-YKL210W_CENPK1137D | rna-NM_001179775.1_CENPK1137D | cds-NP_012712.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:36958-40032:+ | gene-YKL210W_EthanolRed | rna-NM_001179775.1_EthanolRed | cds-NP_012712.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:37017-40091:+ | gene-YKL210W_FaliES1 | rna-NM_001179775.1_FaliES1 | cds-NP_012712.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:36632-39706:+ | gene-YKL210W_JAY291 | rna-NM_001179775.1_JAY291 | cds-NP_012712.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:45193-48267:+ | gene-YKL210W_MUCL30387 | rna-NM_001179775.1_MUCL30387 | cds-NP_012712.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:39522-42596:+ | gene-YKL210W_MUCL30388 | rna-NM_001179775.1_MUCL30388 | cds-NP_012712.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:37059-40133:+ | gene-YKL210W_MUCL39482 | rna-NM_001179775.1_MUCL39482 | cds-NP_012712.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:40837-43911:+ | gene-YKL210W_MUCL42920 | rna-NM_001179775.1_MUCL42920 | cds-NP_012712.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:39152-42226:+ | gene-YKL210W_NCIM3186 | rna-NM_001179775.1_NCIM3186 | cds-NP_012712.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:37081-40155:+ | gene-YKL210W_NCYC1407 | rna-NM_001179775.1_NCYC1407 | cds-NP_012712.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:45267-48341:+ | gene-YKL210W_PE2H3 | rna-NM_001179775.1_PE2H3 | cds-NP_012712.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:41465-44539:+ | gene-YKL210W_PE2H4 | rna-NM_001179775.1_PE2H4 | cds-NP_012712.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:39163-42237:+ | gene-YKL210W_S288C | rna-NM_001179775.1_S288C | cds-NP_012712.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000092.1:25638-28712:- | gene-YKL210W_SA1 | rna-NM_001179775.1_SA1 | cds-NP_012712.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:37765-40839:+ | gene-YKL210W_ThermosaccDry | rna-NM_001179775.1_ThermosaccDry | cds-NP_012712.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:36873-39947:+ | gene-YKL210W_VR1 | rna-NM_001179775.1_VR1 | cds-NP_012712.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:36682-39756:+ | gene-YKL210W_ZTW1 | rna-NM_001179775.1_ZTW1 | cds-NP_012712.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:45394-48471:+ | gene-YKL210W_Sparadoxus | rna-NM_001179775.1_Sparadoxus | cds-NP_012712.1_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |