Gene name: TYR1
Reference locus (S288C): YBR166C
Gene biotype: protein_coding
Description: Prephenate dehydrogenase involved in tyrosine biosynthesis; expression is dependent on phenylalanine levels; Belongs to the prephenate/arogenate dehydrogenase family
Top 10 interactors (score): PRO3 (0.995); THR4 (0.994); PHA2 (0.993); ARO7 (0.993); SER2 (0.989); SSU72 (0.974); PCF11 (0.963); ARO8 (0.96); HIS5 (0.959); TRP3 (0.955); TRP5 (0.951); FCP1 (0.942); ARO9 (0.942); AAT2 (0.937); AAT1 (0.937); RPO21 (0.932); RTR1 (0.918); RTT103 (0.918); NAB3 (0.911); ARO2 (0.896)
Homologues (species, bitscore): AT1G15710 (Arabidopsis thaliana, 56.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:552715-554073:- | gene-YBR166C_AKU4011 | rna-NM_001178514.1_AKU4011 | cds-NP_009725.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:543227-544585:- | gene-YBR166C_BG1 | rna-NM_001178514.1_BG1 | cds-NP_009725.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:555738-557096:- | gene-YBR166C_Bruggeman | rna-NM_001178514.1_Bruggeman | cds-NP_009725.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:449854-451212:- | gene-YBR166C_CAT1 | rna-NM_001178514.1_CAT1 | cds-NP_009725.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:544498-545856:- | gene-YBR166C_CBS1585 | rna-NM_001178514.1_CBS1585 | cds-NP_009725.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:552580-553938:- | gene-YBR166C_CBS436 | rna-NM_001178514.1_CBS436 | cds-NP_009725.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:641981-643339:- | gene-YBR166C_CBS6412 | rna-NM_001178514.1_CBS6412 | cds-NP_009725.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:550053-551411:- | gene-YBR166C_CBS6413 | rna-NM_001178514.1_CBS6413 | cds-NP_009725.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:563642-565000:- | gene-YBR166C_CENPK1137D | rna-NM_001178514.1_CENPK1137D | cds-NP_009725.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:678561-679919:- | gene-YBR166C_EthanolRed | rna-NM_001178514.1_EthanolRed | cds-NP_009725.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:568793-570151:- | gene-YBR166C_FaliES1 | rna-NM_001178514.1_FaliES1 | cds-NP_009725.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000310.1:8623-9981:- | gene-YBR166C_JAY291 | rna-NM_001178514.1_JAY291 | cds-NP_009725.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:557392-558750:- | gene-YBR166C_MUCL30387 | rna-NM_001178514.1_MUCL30387 | cds-NP_009725.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:556677-558035:- | gene-YBR166C_MUCL30388 | rna-NM_001178514.1_MUCL30388 | cds-NP_009725.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:542870-544228:- | gene-YBR166C_MUCL39482 | rna-NM_001178514.1_MUCL39482 | cds-NP_009725.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:552793-554151:- | gene-YBR166C_MUCL42920 | rna-NM_001178514.1_MUCL42920 | cds-NP_009725.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:569639-570997:- | gene-YBR166C_NCIM3186 | rna-NM_001178514.1_NCIM3186 | cds-NP_009725.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:545438-546796:- | gene-YBR166C_NCYC1407 | rna-NM_001178514.1_NCYC1407 | cds-NP_009725.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:558097-559455:- | gene-YBR166C_PE2H3 | rna-NM_001178514.1_PE2H3 | cds-NP_009725.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:555773-557131:- | gene-YBR166C_PE2H4 | rna-NM_001178514.1_PE2H4 | cds-NP_009725.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:569842-571200:- | gene-YBR166C_S288C | rna-NM_001178514.1_S288C | cds-NP_009725.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:91090-92448:- | gene-YBR166C_SA1 | rna-NM_001178514.1_SA1 | cds-NP_009725.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:567803-569161:- | gene-YBR166C_ThermosaccDry | rna-NM_001178514.1_ThermosaccDry | cds-NP_009725.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:549250-550608:- | gene-YBR166C_VR1 | rna-NM_001178514.1_VR1 | cds-NP_009725.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:542918-544276:- | gene-YBR166C_ZTW1 | rna-NM_001178514.1_ZTW1 | cds-NP_009725.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:580260-581618:- | gene-YBR166C_Sparadoxus | rna-NM_001178514.1_Sparadoxus | cds-NP_009725.1_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |