Gene name: TVS1
Reference locus (S288C): YCR061W
Gene biotype: protein_coding
Description: Uncharacterized membrane protein YCR061W; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; induced by treatment with 8-methoxypsoralen and UVA irradiation
Top 10 interactors (score): TED1 (0.783); YPR063C (0.76); PRD1 (0.709); MNL2 (0.698); YNL058C (0.695); COY1 (0.646); OSM1 (0.624); VTH2 (0.617); RRN11 (0.572); ALO1 (0.571); TMA108 (0.57); NIS1 (0.525); EMP24 (0.518); LAM6 (0.499); SEA4 (0.499); TSC3 (0.481); SUR1 (0.469); VAN1 (0.451); ISW1 (0.402)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:220033-221928:+ | gene-YCR061W_AKU4011 | rna-NM_001178772.1_AKU4011 | cds-NP_009987.2_AKU4011 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:78736-80631:+ | gene-YCR061W_1_BG1 | Unknown | Unknown | 100.0 | 100.0 | Mismatch | 2 | 2 | 1 | Unknown | Unknown | Unknown | Unknown | Unknown |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:74518-76413:+ | gene-YCR061W_BG1 | rna-NM_001178772.1_BG1 | cds-NP_009987.2_BG1 | 100.0 | 100.0 | Mismatch | 2 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:215994-217889:+ | gene-YCR061W_Bruggeman | rna-NM_001178772.1_Bruggeman | cds-NP_009987.2_Bruggeman | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:227356-229251:+ | gene-YCR061W_CAT1 | rna-NM_001178772.1_CAT1 | cds-NP_009987.2_CAT1 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:214811-216706:+ | gene-YCR061W_CBS1585 | rna-NM_001178772.1_CBS1585 | cds-NP_009987.2_CBS1585 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:226696-228591:+ | gene-YCR061W_CBS436 | rna-NM_001178772.1_CBS436 | cds-NP_009987.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:206551-208446:+ | gene-YCR061W_CBS6412 | rna-NM_001178772.1_CBS6412 | cds-NP_009987.2_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:220928-222823:+ | gene-YCR061W_CBS6413 | rna-NM_001178772.1_CBS6413 | cds-NP_009987.2_CBS6413 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:224760-226655:+ | gene-YCR061W_CENPK1137D | rna-NM_001178772.1_CENPK1137D | cds-NP_009987.2_CENPK1137D | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:215998-217893:+ | gene-YCR061W_EthanolRed | rna-NM_001178772.1_EthanolRed | cds-NP_009987.2_EthanolRed | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:221163-223058:+ | gene-YCR061W_FaliES1 | rna-NM_001178772.1_FaliES1 | cds-NP_009987.2_FaliES1 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000014.1:144-2027:- | gene-YCR061W_JAY291 | rna-NM_001178772.1_JAY291 | cds-NP_009987.2_JAY291 | 98.9 | 99.3 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:212965-214860:+ | gene-YCR061W_MUCL30387 | rna-NM_001178772.1_MUCL30387 | cds-NP_009987.2_MUCL30387 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:213283-215178:+ | gene-YCR061W_MUCL30388 | rna-NM_001178772.1_MUCL30388 | cds-NP_009987.2_MUCL30388 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:221384-223279:+ | gene-YCR061W_MUCL39482 | rna-NM_001178772.1_MUCL39482 | cds-NP_009987.2_MUCL39482 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:217826-219721:+ | gene-YCR061W_MUCL42920 | rna-NM_001178772.1_MUCL42920 | cds-NP_009987.2_MUCL42920 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:225195-227090:+ | gene-YCR061W_NCIM3186 | rna-NM_001178772.1_NCIM3186 | cds-NP_009987.2_NCIM3186 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:222243-224138:+ | gene-YCR061W_NCYC1407 | rna-NM_001178772.1_NCYC1407 | cds-NP_009987.2_NCYC1407 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:230913-232808:+ | gene-YCR061W_PE2H3 | rna-NM_001178772.1_PE2H3 | cds-NP_009987.2_PE2H3 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:225440-227323:+ | gene-YCR061W_PE2H4 | rna-NM_001178772.1_PE2H4 | cds-NP_009987.2_PE2H4 | 98.9 | 99.3 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:225563-227458:+ | gene-YCR061W_S288C | rna-NM_001178772.1_S288C | cds-NP_009987.2_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000044.1:25465-27348:+ | gene-YCR061W_SA1 | rna-NM_001178772.1_SA1 | cds-NP_009987.2_SA1 | 99.1 | 99.3 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:221148-223043:+ | gene-YCR061W_ThermosaccDry | rna-NM_001178772.1_ThermosaccDry | cds-NP_009987.2_ThermosaccDry | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:232413-234308:+ | gene-YCR061W_VR1 | rna-NM_001178772.1_VR1 | cds-NP_009987.2_VR1 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:218965-220860:+ | gene-YCR061W_ZTW1 | rna-NM_001178772.1_ZTW1 | cds-NP_009987.2_ZTW1 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:253127-255016:+ | gene-YCR061W_Sparadoxus | rna-NM_001178772.1_Sparadoxus | cds-NP_009987.2_Sparadoxus | 89.3 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |