Gene name: TVP18
Reference locus (S288C): YMR071C
Gene biotype: protein_coding
Description: Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; may interact with ribosomes, based on co-purification experiments; may have a role in intracellular sterol transport
Top 10 interactors (score): TVP15 (0.962); TVP23 (0.944); TVP38 (0.909); YIP4 (0.762); TLG2 (0.751); SVP26 (0.748); GVP36 (0.747); SET6 (0.744); YIP5 (0.699); KTR3 (0.698); YIP1 (0.696); ATP11 (0.645); UIP3 (0.645); PEX29 (0.645); ULP1 (0.645); ERG24 (0.569); SED5 (0.526); YPT6 (0.499); MYO2 (0.467); BUD14 (0.459)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:448468-448971:- | gene-YMR071C_AKU4011 | rna-NM_001182569.1_AKU4011 | cds-NP_013787.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:93816-94319:+ | gene-YMR071C_BG1 | rna-NM_001182569.1_BG1 | cds-NP_013787.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:390619-391122:- | gene-YMR071C_Bruggeman | rna-NM_001182569.1_Bruggeman | cds-NP_013787.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:390979-391482:- | gene-YMR071C_CAT1 | rna-NM_001182569.1_CAT1 | cds-NP_013787.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:381411-381914:- | gene-YMR071C_CBS1585 | rna-NM_001182569.1_CBS1585 | cds-NP_013787.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:386961-387464:- | gene-YMR071C_CBS436 | rna-NM_001182569.1_CBS436 | cds-NP_013787.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:494484-494987:- | gene-YMR071C_CBS6412 | rna-NM_001182569.1_CBS6412 | cds-NP_013787.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:380668-381171:- | gene-YMR071C_CBS6413 | rna-NM_001182569.1_CBS6413 | cds-NP_013787.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:404867-405370:- | gene-YMR071C_CENPK1137D | rna-NM_001182569.1_CENPK1137D | cds-NP_013787.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:381273-381776:- | gene-YMR071C_EthanolRed | rna-NM_001182569.1_EthanolRed | cds-NP_013787.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:384439-384942:- | gene-YMR071C_FaliES1 | rna-NM_001182569.1_FaliES1 | cds-NP_013787.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:52015-52518:+ | gene-YMR071C_JAY291 | rna-NM_001182569.1_JAY291 | cds-NP_013787.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:386350-386853:- | gene-YMR071C_MUCL30387 | rna-NM_001182569.1_MUCL30387 | cds-NP_013787.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:391038-391541:- | gene-YMR071C_MUCL30388 | rna-NM_001182569.1_MUCL30388 | cds-NP_013787.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:381699-382202:- | gene-YMR071C_MUCL39482 | rna-NM_001182569.1_MUCL39482 | cds-NP_013787.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:388352-388855:- | gene-YMR071C_MUCL42920 | rna-NM_001182569.1_MUCL42920 | cds-NP_013787.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:410716-411219:- | gene-YMR071C_NCIM3186 | rna-NM_001182569.1_NCIM3186 | cds-NP_013787.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:381611-382114:- | gene-YMR071C_NCYC1407 | rna-NM_001182569.1_NCYC1407 | cds-NP_013787.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:387559-388062:- | gene-YMR071C_PE2H3 | rna-NM_001182569.1_PE2H3 | cds-NP_013787.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:393654-394157:- | gene-YMR071C_PE2H4 | rna-NM_001182569.1_PE2H4 | cds-NP_013787.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:410762-411265:- | gene-YMR071C_S288C | rna-NM_001182569.1_S288C | cds-NP_013787.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:138906-139409:+ | gene-YMR071C_SA1 | rna-NM_001182569.1_SA1 | cds-NP_013787.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:382242-382745:- | gene-YMR071C_ThermosaccDry | rna-NM_001182569.1_ThermosaccDry | cds-NP_013787.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:394145-394648:- | gene-YMR071C_VR1 | rna-NM_001182569.1_VR1 | cds-NP_013787.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:360516-361019:- | gene-YMR071C_ZTW1 | rna-NM_001182569.1_ZTW1 | cds-NP_013787.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:394087-394590:- | gene-YMR071C_Sparadoxus | rna-NM_001182569.1_Sparadoxus | cds-NP_013787.1_Sparadoxus | 92.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |