Gene name: TVP15
Reference locus (S288C): YDR100W
Gene biotype: protein_coding
Description: Golgi apparatus membrane protein tvp15; Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p
Top 10 interactors (score): TVP18 (0.962); TVP23 (0.948); TVP38 (0.923); YIP5 (0.78); YIP4 (0.775); TLG2 (0.748); GVP36 (0.741); SVP26 (0.729); KTR3 (0.678); YIP1 (0.672); ULP1 (0.657); ATP11 (0.645); UIP3 (0.645); PEX29 (0.645); YPT6 (0.645); MRPL3 (0.645); RPT2 (0.564); SGF73 (0.541); SED5 (0.485); SYS1 (0.476)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:626295-626726:+ | gene-YDR100W_AKU4011 | rna-NM_001180408.3_AKU4011 | cds-NP_010385.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:498192-498623:- | gene-YDR100W_BG1 | rna-NM_001180408.3_BG1 | cds-NP_010385.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:658382-658813:+ | gene-YDR100W_Bruggeman | rna-NM_001180408.3_Bruggeman | cds-NP_010385.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:644255-644686:+ | gene-YDR100W_CAT1 | rna-NM_001180408.3_CAT1 | cds-NP_010385.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:617314-617745:+ | gene-YDR100W_CBS1585 | rna-NM_001180408.3_CBS1585 | cds-NP_010385.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:642713-643144:+ | gene-YDR100W_CBS436 | rna-NM_001180408.3_CBS436 | cds-NP_010385.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:613729-614160:+ | gene-YDR100W_CBS6412 | rna-NM_001180408.3_CBS6412 | cds-NP_010385.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:642260-642691:+ | gene-YDR100W_CBS6413 | rna-NM_001180408.3_CBS6413 | cds-NP_010385.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:647742-648173:+ | gene-YDR100W_CENPK1137D | rna-NM_001180408.3_CENPK1137D | cds-NP_010385.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:628080-628511:+ | gene-YDR100W_EthanolRed | rna-NM_001180408.3_EthanolRed | cds-NP_010385.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:634874-635305:+ | gene-YDR100W_FaliES1 | rna-NM_001180408.3_FaliES1 | cds-NP_010385.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000125.1:3542-3973:+ | gene-YDR100W_JAY291 | rna-NM_001180408.3_JAY291 | cds-NP_010385.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:644288-644719:+ | gene-YDR100W_MUCL30387 | rna-NM_001180408.3_MUCL30387 | cds-NP_010385.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:633312-633743:+ | gene-YDR100W_MUCL30388 | rna-NM_001180408.3_MUCL30388 | cds-NP_010385.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:618684-619115:+ | gene-YDR100W_MUCL39482 | rna-NM_001180408.3_MUCL39482 | cds-NP_010385.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:556629-557060:+ | gene-YDR100W_MUCL42920 | rna-NM_001180408.3_MUCL42920 | cds-NP_010385.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:654936-655367:+ | gene-YDR100W_NCIM3186 | rna-NM_001180408.3_NCIM3186 | cds-NP_010385.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:617595-618026:+ | gene-YDR100W_NCYC1407 | rna-NM_001180408.3_NCYC1407 | cds-NP_010385.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:637409-637840:+ | gene-YDR100W_PE2H3 | rna-NM_001180408.3_PE2H3 | cds-NP_010385.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:636714-637145:+ | gene-YDR100W_PE2H4 | rna-NM_001180408.3_PE2H4 | cds-NP_010385.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:655013-655444:+ | gene-YDR100W_S288C | rna-NM_001180408.3_S288C | cds-NP_010385.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:3623-4054:+ | gene-YDR100W_SA1 | rna-NM_001180408.3_SA1 | cds-NP_010385.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:634403-634834:+ | gene-YDR100W_ThermosaccDry | rna-NM_001180408.3_ThermosaccDry | cds-NP_010385.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:647319-647750:+ | gene-YDR100W_VR1 | rna-NM_001180408.3_VR1 | cds-NP_010385.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:631987-632418:+ | gene-YDR100W_ZTW1 | rna-NM_001180408.3_ZTW1 | cds-NP_010385.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:636652-637083:+ | gene-YDR100W_Sparadoxus | rna-NM_001180408.3_Sparadoxus | cds-NP_010385.3_Sparadoxus | 92.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |