Gene name: TTI2
Reference locus (S288C): YJR136C
Gene biotype: protein_coding
Description: TEL2-interacting protein 2; Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1; involved in the cellular stress response; similar to S. pombe Tti2p; may interact with Rsm23p; GFP-fusion protein localizes to the cytoplasm
Top 10 interactors (score): TTI1 (0.997); TEL2 (0.99); TRA1 (0.981); RVB1 (0.957); RVB2 (0.915); ASA1 (0.9); LTO1 (0.785); YDL211C (0.765); YLR410W-B (0.752); YDR476C (0.746); YNL320W (0.693); EHD3 (0.693); YDL218W (0.693); SGT1 (0.676); MRPL39 (0.618); ILS1 (0.593); MRPL28 (0.592); ARC19 (0.573); PHO92 (0.573); TAH1 (0.571)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:648939-650204:- | gene-YJR136C_AKU4011 | rna-NM_001181794.3_AKU4011 | cds-NP_012670.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000076.1:23398-24663:+ | gene-YJR136C_BG1 | rna-NM_001181794.3_BG1 | cds-NP_012670.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:664671-665936:- | gene-YJR136C_Bruggeman | rna-NM_001181794.3_Bruggeman | cds-NP_012670.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:669306-670571:- | gene-YJR136C_CAT1 | rna-NM_001181794.3_CAT1 | cds-NP_012670.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:660983-662248:- | gene-YJR136C_CBS1585 | rna-NM_001181794.3_CBS1585 | cds-NP_012670.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:679853-681118:- | gene-YJR136C_CBS436 | rna-NM_001181794.3_CBS436 | cds-NP_012670.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:647758-649023:- | gene-YJR136C_CBS6412 | rna-NM_001181794.3_CBS6412 | cds-NP_012670.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:650417-651682:- | gene-YJR136C_CBS6413 | rna-NM_001181794.3_CBS6413 | cds-NP_012670.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:659801-661066:- | gene-YJR136C_CENPK1137D | rna-NM_001181794.3_CENPK1137D | cds-NP_012670.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:653360-654625:- | gene-YJR136C_EthanolRed | rna-NM_001181794.3_EthanolRed | cds-NP_012670.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:664823-666088:- | gene-YJR136C_FaliES1 | rna-NM_001181794.3_FaliES1 | cds-NP_012670.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:23071-24336:+ | gene-YJR136C_JAY291 | rna-NM_001181794.3_JAY291 | cds-NP_012670.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:663698-664963:- | gene-YJR136C_MUCL30387 | rna-NM_001181794.3_MUCL30387 | cds-NP_012670.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:661184-662449:- | gene-YJR136C_MUCL30388 | rna-NM_001181794.3_MUCL30388 | cds-NP_012670.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:654468-655733:- | gene-YJR136C_MUCL39482 | rna-NM_001181794.3_MUCL39482 | cds-NP_012670.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:659203-660468:- | gene-YJR136C_MUCL42920 | rna-NM_001181794.3_MUCL42920 | cds-NP_012670.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:677420-678685:- | gene-YJR136C_NCIM3186 | rna-NM_001181794.3_NCIM3186 | cds-NP_012670.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:652015-653280:- | gene-YJR136C_NCYC1407 | rna-NM_001181794.3_NCYC1407 | cds-NP_012670.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:670205-671470:- | gene-YJR136C_PE2H3 | rna-NM_001181794.3_PE2H3 | cds-NP_012670.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:663894-665159:- | gene-YJR136C_PE2H4 | rna-NM_001181794.3_PE2H4 | cds-NP_012670.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:677441-678706:- | gene-YJR136C_S288C | rna-NM_001181794.3_S288C | cds-NP_012670.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000069.1:23423-24688:+ | gene-YJR136C_SA1 | rna-NM_001181794.3_SA1 | cds-NP_012670.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:658754-660019:- | gene-YJR136C_ThermosaccDry | rna-NM_001181794.3_ThermosaccDry | cds-NP_012670.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:661125-662390:- | gene-YJR136C_VR1 | rna-NM_001181794.3_VR1 | cds-NP_012670.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:638103-639368:- | gene-YJR136C_ZTW1 | rna-NM_001181794.3_ZTW1 | cds-NP_012670.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:672383-673648:- | gene-YJR136C_Sparadoxus | rna-NM_001181794.3_Sparadoxus | cds-NP_012670.3_Sparadoxus | 86.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |