Gene name: TSC11
Reference locus (S288C): YER093C
Gene biotype: protein_coding
Description: Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p); TORC2 is a membrane-associated complex that regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; involved in sphingolipid metabolism; contains a RasGEFN domain; Belongs to the RICTOR family
Top 10 interactors (score): AVO1 (0.999); AVO2 (0.999); LST8 (0.999); TOR2 (0.999); TOR1 (0.999); BIT61 (0.997); YPK1 (0.996); KOG1 (0.996); SCH9 (0.99); SLM1 (0.986); BIT2 (0.984); YPK2 (0.966); RHB1 (0.936); TCO89 (0.926); CDC53 (0.911); PKH1 (0.858); ECM25 (0.848); FPR1 (0.848); TEP1 (0.838); GTR1 (0.819)
Homologues (species, bitscore): RICTOR (Homo sapiens, 233.8); Rictor (Mus musculus, 225.3); rictorb (Danio rerio, 220.3); rictor (Xenopus tropicalis, 224.6); rictor (Drosophila melanogaster, 115.2); rict-1 (Caenorhabditis elegans, 70.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:337092-341384:- | gene-YER093C_AKU4011 | rna-NM_001178984.1_AKU4011 | cds-NP_011018.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:84451-88743:+ | gene-YER093C_BG1 | rna-NM_001178984.1_BG1 | cds-NP_011018.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:346652-350944:- | gene-YER093C_Bruggeman | rna-NM_001178984.1_Bruggeman | cds-NP_011018.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:341006-345298:- | gene-YER093C_CAT1 | rna-NM_001178984.1_CAT1 | cds-NP_011018.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:336957-341249:- | gene-YER093C_CBS1585 | rna-NM_001178984.1_CBS1585 | cds-NP_011018.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:339062-343354:- | gene-YER093C_CBS436 | rna-NM_001178984.1_CBS436 | cds-NP_011018.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:336413-340705:- | gene-YER093C_CBS6412 | rna-NM_001178984.1_CBS6412 | cds-NP_011018.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:342403-346695:- | gene-YER093C_CBS6413 | rna-NM_001178984.1_CBS6413 | cds-NP_011018.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:341230-345522:- | gene-YER093C_CENPK1137D | rna-NM_001178984.1_CENPK1137D | cds-NP_011018.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:337435-341727:- | gene-YER093C_EthanolRed | rna-NM_001178984.1_EthanolRed | cds-NP_011018.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:337880-342172:- | gene-YER093C_FaliES1 | rna-NM_001178984.1_FaliES1 | cds-NP_011018.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000153.1:52940-57232:- | gene-YER093C_JAY291 | rna-NM_001178984.1_JAY291 | cds-NP_011018.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:342047-346339:- | gene-YER093C_MUCL30387 | rna-NM_001178984.1_MUCL30387 | cds-NP_011018.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:337721-342013:- | gene-YER093C_MUCL30388 | rna-NM_001178984.1_MUCL30388 | cds-NP_011018.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:335981-340273:- | gene-YER093C_MUCL39482 | rna-NM_001178984.1_MUCL39482 | cds-NP_011018.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:343186-347478:- | gene-YER093C_MUCL42920 | rna-NM_001178984.1_MUCL42920 | cds-NP_011018.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:343319-347611:- | gene-YER093C_NCIM3186 | rna-NM_001178984.1_NCIM3186 | cds-NP_011018.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:341044-345336:- | gene-YER093C_NCYC1407 | rna-NM_001178984.1_NCYC1407 | cds-NP_011018.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:351695-355987:- | gene-YER093C_PE2H3 | rna-NM_001178984.1_PE2H3 | cds-NP_011018.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:341636-345928:- | gene-YER093C_PE2H4 | rna-NM_001178984.1_PE2H4 | cds-NP_011018.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:343320-347612:- | gene-YER093C_S288C | rna-NM_001178984.1_S288C | cds-NP_011018.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000023.1:52938-57230:- | gene-YER093C_SA1 | rna-NM_001178984.1_SA1 | cds-NP_011018.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:338677-342969:- | gene-YER093C_ThermosaccDry | rna-NM_001178984.1_ThermosaccDry | cds-NP_011018.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:339337-343629:- | gene-YER093C_VR1 | rna-NM_001178984.1_VR1 | cds-NP_011018.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:335835-340127:- | gene-YER093C_ZTW1 | rna-NM_001178984.1_ZTW1 | cds-NP_011018.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:339257-343549:- | gene-YER093C_Sparadoxus | rna-NM_001178984.1_Sparadoxus | cds-NP_011018.1_Sparadoxus | 91.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |