Gene name: TRX3
Reference locus (S288C): YCR083W
Gene biotype: protein_coding
Description: Thioredoxin-3, mitochondrial; Mitochondrial thioredoxin; highly conserved oxidoreductase required to maintain the redox homeostasis of the cell, forms the mitochondrial thioredoxin system with Trr2p, redox state is maintained by both Trr2p and Glr1p
Top 10 interactors (score): TRR2 (0.988); TRR1 (0.979); GLR1 (0.97); PRX1 (0.924); GRX2 (0.886); GPX1 (0.881); HYR1 (0.864); GRX5 (0.837); CTA1 (0.808); GPX2 (0.803); CTT1 (0.789); SRX1 (0.779); GRX1 (0.769); SOD1 (0.751); GSH1 (0.743); MXR2 (0.743); TSA1 (0.722); YDL057W (0.7); YDL009C (0.698); SOD2 (0.693)
Homologues (species, bitscore): TXN (Homo sapiens, 94.0); Txn1 (Mus musculus, 90.1); zgc:56493 (Danio rerio, 77.8); LOC100170420 (Xenopus tropicalis, 99.8); Trx-2 (Drosophila melanogaster, 82.8); png-1 (Caenorhabditis elegans, 79.0); TRX2 (Arabidopsis thaliana, 103.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:254079-254462:+ | gene-YCR083W_AKU4011 | rna-NM_001178789.1_AKU4011 | cds-NP_010006.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:112733-113116:+ | gene-YCR083W_BG1 | rna-NM_001178789.1_BG1 | cds-NP_010006.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:250288-250671:+ | gene-YCR083W_Bruggeman | rna-NM_001178789.1_Bruggeman | cds-NP_010006.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:261338-261721:+ | gene-YCR083W_CAT1 | rna-NM_001178789.1_CAT1 | cds-NP_010006.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:248894-249277:+ | gene-YCR083W_CBS1585 | rna-NM_001178789.1_CBS1585 | cds-NP_010006.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:260673-261056:+ | gene-YCR083W_CBS436 | rna-NM_001178789.1_CBS436 | cds-NP_010006.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:240596-240979:+ | gene-YCR083W_CBS6412 | rna-NM_001178789.1_CBS6412 | cds-NP_010006.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:254944-255327:+ | gene-YCR083W_CBS6413 | rna-NM_001178789.1_CBS6413 | cds-NP_010006.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:258775-259158:+ | gene-YCR083W_CENPK1137D | rna-NM_001178789.1_CENPK1137D | cds-NP_010006.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:249894-250277:+ | gene-YCR083W_EthanolRed | rna-NM_001178789.1_EthanolRed | cds-NP_010006.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:255257-255640:+ | gene-YCR083W_FaliES1 | rna-NM_001178789.1_FaliES1 | cds-NP_010006.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000323.1:33152-33535:- | gene-YCR083W_JAY291 | rna-NM_001178789.1_JAY291 | cds-NP_010006.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:247416-247799:+ | gene-YCR083W_MUCL30387 | rna-NM_001178789.1_MUCL30387 | cds-NP_010006.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:247283-247666:+ | gene-YCR083W_MUCL30388 | rna-NM_001178789.1_MUCL30388 | cds-NP_010006.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:255458-255841:+ | gene-YCR083W_MUCL39482 | rna-NM_001178789.1_MUCL39482 | cds-NP_010006.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:251863-252246:+ | gene-YCR083W_MUCL42920 | rna-NM_001178789.1_MUCL42920 | cds-NP_010006.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:259210-259593:+ | gene-YCR083W_NCIM3186 | rna-NM_001178789.1_NCIM3186 | cds-NP_010006.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:256297-256680:+ | gene-YCR083W_NCYC1407 | rna-NM_001178789.1_NCYC1407 | cds-NP_010006.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:270851-271234:+ | gene-YCR083W_PE2H3 | rna-NM_001178789.1_PE2H3 | cds-NP_010006.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:259405-259788:+ | gene-YCR083W_PE2H4 | rna-NM_001178789.1_PE2H4 | cds-NP_010006.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:259578-259961:+ | gene-YCR083W_S288C | rna-NM_001178789.1_S288C | cds-NP_010006.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000044.1:59425-59808:+ | gene-YCR083W_SA1 | rna-NM_001178789.1_SA1 | cds-NP_010006.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:255184-255567:+ | gene-YCR083W_ThermosaccDry | rna-NM_001178789.1_ThermosaccDry | cds-NP_010006.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:266392-266775:+ | gene-YCR083W_VR1 | rna-NM_001178789.1_VR1 | cds-NP_010006.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:253039-253422:+ | gene-YCR083W_ZTW1 | rna-NM_001178789.1_ZTW1 | cds-NP_010006.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:287191-287574:+ | gene-YCR083W_Sparadoxus | rna-NM_001178789.1_Sparadoxus | cds-NP_010006.1_Sparadoxus | 91.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |