Gene name: TRS65
Reference locus (S288C): YGR166W
Gene biotype: protein_coding
Description: Trafficking protein particle complex II-specific subunit 65; Component of transport protein particle (TRAPP) complex II; TRAPPII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating intra-Golgi and endosome-Golgi traffic; role in cell wall beta-glucan biosynthesis and the stress response
Top 10 interactors (score): TRS120 (0.999); BET3 (0.999); TRS20 (0.998); TRS130 (0.998); TRS33 (0.998); TCA17 (0.997); TRS31 (0.997); BET5 (0.995); TRS23 (0.995); TRS85 (0.995); YPT31 (0.918); KRE1 (0.874); GEA2 (0.841); YPT1 (0.825); YPT32 (0.753); KRE6 (0.717); ROT2 (0.711); KRE5 (0.702); SEC23 (0.702); CWH41 (0.69)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:798265-799947:+ | gene-YGR166W_AKU4011 | rna-NM_001181295.1_AKU4011 | cds-NP_011682.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:76394-78076:+ | gene-YGR166W_BG1 | rna-NM_001181295.1_BG1 | cds-NP_011682.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:804196-805878:+ | gene-YGR166W_Bruggeman | rna-NM_001181295.1_Bruggeman | cds-NP_011682.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:800046-801728:+ | gene-YGR166W_CAT1 | rna-NM_001181295.1_CAT1 | cds-NP_011682.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:798981-800663:+ | gene-YGR166W_CBS1585 | rna-NM_001181295.1_CBS1585 | cds-NP_011682.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:802877-804559:+ | gene-YGR166W_CBS436 | rna-NM_001181295.1_CBS436 | cds-NP_011682.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:790350-792032:+ | gene-YGR166W_CBS6412 | rna-NM_001181295.1_CBS6412 | cds-NP_011682.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:795845-797527:+ | gene-YGR166W_CBS6413 | rna-NM_001181295.1_CBS6413 | cds-NP_011682.1_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:830250-831932:+ | gene-YGR166W_CENPK1137D | rna-NM_001181295.1_CENPK1137D | cds-NP_011682.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:784855-786537:+ | gene-YGR166W_EthanolRed | rna-NM_001181295.1_EthanolRed | cds-NP_011682.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:789246-790928:+ | gene-YGR166W_FaliES1 | rna-NM_001181295.1_FaliES1 | cds-NP_011682.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000112.1:31170-32852:+ | gene-YGR166W_JAY291 | rna-NM_001181295.1_JAY291 | cds-NP_011682.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:801686-803368:+ | gene-YGR166W_MUCL30387 | rna-NM_001181295.1_MUCL30387 | cds-NP_011682.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:801385-803067:+ | gene-YGR166W_MUCL30388 | rna-NM_001181295.1_MUCL30388 | cds-NP_011682.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:794556-796238:+ | gene-YGR166W_MUCL39482 | rna-NM_001181295.1_MUCL39482 | cds-NP_011682.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:809515-811197:+ | gene-YGR166W_MUCL42920 | rna-NM_001181295.1_MUCL42920 | cds-NP_011682.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:830515-832197:+ | gene-YGR166W_NCIM3186 | rna-NM_001181295.1_NCIM3186 | cds-NP_011682.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:789664-791346:+ | gene-YGR166W_NCYC1407 | rna-NM_001181295.1_NCYC1407 | cds-NP_011682.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:808863-810545:+ | gene-YGR166W_PE2H3 | rna-NM_001181295.1_PE2H3 | cds-NP_011682.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:813973-815655:+ | gene-YGR166W_PE2H4 | rna-NM_001181295.1_PE2H4 | cds-NP_011682.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:830515-832197:+ | gene-YGR166W_S288C | rna-NM_001181295.1_S288C | cds-NP_011682.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000035.1:54165-55847:+ | gene-YGR166W_SA1 | rna-NM_001181295.1_SA1 | cds-NP_011682.1_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:809757-811439:+ | gene-YGR166W_ThermosaccDry | rna-NM_001181295.1_ThermosaccDry | cds-NP_011682.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:914013-915695:+ | gene-YGR166W_VR1 | rna-NM_001181295.1_VR1 | cds-NP_011682.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:111201-112883:+ | gene-YGR166W_ZTW1 | rna-NM_001181295.1_ZTW1 | cds-NP_011682.1_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:800640-802319:+ | gene-YGR166W_Sparadoxus | rna-NM_001181295.1_Sparadoxus | cds-NP_011682.1_Sparadoxus | 87.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |