Gene name: TRS31
Reference locus (S288C): YDR472W
Gene biotype: protein_coding
Description: Trafficking protein particle complex subunit 31; Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII)
Top 10 interactors (score): TRS23 (0.999); BET5 (0.999); BET3 (0.999); TRS120 (0.999); TRS20 (0.999); TRS33 (0.999); TRS85 (0.999); TRS130 (0.999); YPT1 (0.998); TRS65 (0.997); TCA17 (0.997); SEC23 (0.944); MRS6 (0.936); BOS1 (0.913); GDI1 (0.9); CTO1 (0.886); YPT31 (0.842); SEC22 (0.815); YKT6 (0.802); YPT32 (0.793)
Homologues (species, bitscore): TRAPPC5 (Homo sapiens, 75.5); Trappc5 (Mus musculus, 75.9); trappc5 (Danio rerio, 79.7); trappc5 (Xenopus tropicalis, 76.3); Trs31 (Drosophila melanogaster, 70.5); trpp-5 (Caenorhabditis elegans, 79.0); AT5G58030 (Arabidopsis thaliana, 107.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1343249-1344100:+ | gene-YDR472W_AKU4011 | rna-NM_001180780.3_AKU4011 | cds-NP_010760.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:218348-219199:+ | gene-YDR472W_BG1 | rna-NM_001180780.3_BG1 | cds-NP_010760.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1374655-1375506:+ | gene-YDR472W_Bruggeman | rna-NM_001180780.3_Bruggeman | cds-NP_010760.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1351798-1352649:+ | gene-YDR472W_CAT1 | rna-NM_001180780.3_CAT1 | cds-NP_010760.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1337545-1338396:+ | gene-YDR472W_CBS1585 | rna-NM_001180780.3_CBS1585 | cds-NP_010760.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1356907-1357758:+ | gene-YDR472W_CBS436 | rna-NM_001180780.3_CBS436 | cds-NP_010760.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1333172-1334023:+ | gene-YDR472W_CBS6412 | rna-NM_001180780.3_CBS6412 | cds-NP_010760.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1356183-1357034:+ | gene-YDR472W_CBS6413 | rna-NM_001180780.3_CBS6413 | cds-NP_010760.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1402018-1402869:+ | gene-YDR472W_CENPK1137D | rna-NM_001180780.3_CENPK1137D | cds-NP_010760.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1346586-1347437:+ | gene-YDR472W_EthanolRed | rna-NM_001180780.3_EthanolRed | cds-NP_010760.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1350139-1350990:+ | gene-YDR472W_FaliES1 | rna-NM_001180780.3_FaliES1 | cds-NP_010760.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:48390-49241:+ | gene-YDR472W_JAY291 | rna-NM_001180780.3_JAY291 | cds-NP_010760.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1357147-1357998:+ | gene-YDR472W_MUCL30387 | rna-NM_001180780.3_MUCL30387 | cds-NP_010760.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1339169-1340020:+ | gene-YDR472W_MUCL30388 | rna-NM_001180780.3_MUCL30388 | cds-NP_010760.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1329029-1329880:+ | gene-YDR472W_MUCL39482 | rna-NM_001180780.3_MUCL39482 | cds-NP_010760.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1271823-1272674:+ | gene-YDR472W_MUCL42920 | rna-NM_001180780.3_MUCL42920 | cds-NP_010760.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1403245-1404096:+ | gene-YDR472W_NCIM3186 | rna-NM_001180780.3_NCIM3186 | cds-NP_010760.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1342802-1343653:+ | gene-YDR472W_NCYC1407 | rna-NM_001180780.3_NCYC1407 | cds-NP_010760.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1353641-1354492:+ | gene-YDR472W_PE2H3 | rna-NM_001180780.3_PE2H3 | cds-NP_010760.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1359215-1360066:+ | gene-YDR472W_PE2H4 | rna-NM_001180780.3_PE2H4 | cds-NP_010760.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1403322-1404173:+ | gene-YDR472W_S288C | rna-NM_001180780.3_S288C | cds-NP_010760.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:212988-213839:- | gene-YDR472W_SA1 | rna-NM_001180780.3_SA1 | cds-NP_010760.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1354361-1355212:+ | gene-YDR472W_ThermosaccDry | rna-NM_001180780.3_ThermosaccDry | cds-NP_010760.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1370085-1370936:+ | gene-YDR472W_VR1 | rna-NM_001180780.3_VR1 | cds-NP_010760.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:397032-397883:+ | gene-YDR472W_ZTW1 | rna-NM_001180780.3_ZTW1 | cds-NP_010760.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1357395-1358246:+ | gene-YDR472W_Sparadoxus | rna-NM_001180780.3_Sparadoxus | cds-NP_010760.3_Sparadoxus | 87.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |