Gene name: TRP4
Reference locus (S288C): YDR354W
Gene biotype: protein_coding
Description: Anthranilate phosphoribosyl transferase; transferase of the tryptophan biosynthetic pathway; catalyzes the phosphoribosylation of anthranilate; subject to the general control system of amino acid biosynthesis
Top 10 interactors (score): TRP3 (0.999); TRP5 (0.999); TRP1 (0.998); TRP2 (0.995); HIS4 (0.883); PHA2 (0.883); ARO7 (0.882); ARO2 (0.866); ADE8 (0.808); ADE1 (0.807); ARO4 (0.795); ARO1 (0.778); ABZ1 (0.768); HOM2 (0.763); HIS6 (0.754); HIS1 (0.752); YIL152W (0.746); ARG5,6 (0.742); HIS5 (0.73); HIS7 (0.713)
Homologues (species, bitscore): At5g17990 (Arabidopsis thaliana, 159.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1130811-1131953:+ | gene-YDR354W_AKU4011 | rna-NM_001180662.3_AKU4011 | cds-NP_010641.3_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:9360-10502:+ | gene-YDR354W_BG1 | rna-NM_001180662.3_BG1 | cds-NP_010641.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1161464-1162606:+ | gene-YDR354W_Bruggeman | rna-NM_001180662.3_Bruggeman | cds-NP_010641.3_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1140054-1141196:+ | gene-YDR354W_CAT1 | rna-NM_001180662.3_CAT1 | cds-NP_010641.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1125528-1126670:+ | gene-YDR354W_CBS1585 | rna-NM_001180662.3_CBS1585 | cds-NP_010641.3_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1144110-1145252:+ | gene-YDR354W_CBS436 | rna-NM_001180662.3_CBS436 | cds-NP_010641.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1121788-1122930:+ | gene-YDR354W_CBS6412 | rna-NM_001180662.3_CBS6412 | cds-NP_010641.3_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1143678-1144820:+ | gene-YDR354W_CBS6413 | rna-NM_001180662.3_CBS6413 | cds-NP_010641.3_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1183393-1184535:+ | gene-YDR354W_CENPK1137D | rna-NM_001180662.3_CENPK1137D | cds-NP_010641.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1135213-1136355:+ | gene-YDR354W_EthanolRed | rna-NM_001180662.3_EthanolRed | cds-NP_010641.3_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1138496-1139638:+ | gene-YDR354W_FaliES1 | rna-NM_001180662.3_FaliES1 | cds-NP_010641.3_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000057.1:51433-52575:- | gene-YDR354W_JAY291 | rna-NM_001180662.3_JAY291 | cds-NP_010641.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1144762-1145904:+ | gene-YDR354W_MUCL30387 | rna-NM_001180662.3_MUCL30387 | cds-NP_010641.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1127368-1128510:+ | gene-YDR354W_MUCL30388 | rna-NM_001180662.3_MUCL30388 | cds-NP_010641.3_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1117062-1118204:+ | gene-YDR354W_MUCL39482 | rna-NM_001180662.3_MUCL39482 | cds-NP_010641.3_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1058996-1060138:+ | gene-YDR354W_MUCL42920 | rna-NM_001180662.3_MUCL42920 | cds-NP_010641.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1184670-1185812:+ | gene-YDR354W_NCIM3186 | rna-NM_001180662.3_NCIM3186 | cds-NP_010641.3_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1130735-1131877:+ | gene-YDR354W_NCYC1407 | rna-NM_001180662.3_NCYC1407 | cds-NP_010641.3_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1141163-1142305:+ | gene-YDR354W_PE2H3 | rna-NM_001180662.3_PE2H3 | cds-NP_010641.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1146748-1147890:+ | gene-YDR354W_PE2H4 | rna-NM_001180662.3_PE2H4 | cds-NP_010641.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1184747-1185889:+ | gene-YDR354W_S288C | rna-NM_001180662.3_S288C | cds-NP_010641.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000072.1:9441-10583:+ | gene-YDR354W_SA1 | rna-NM_001180662.3_SA1 | cds-NP_010641.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1142777-1143919:+ | gene-YDR354W_ThermosaccDry | rna-NM_001180662.3_ThermosaccDry | cds-NP_010641.3_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:570127-571269:+ | gene-YDR354W_VR1 | rna-NM_001180662.3_VR1 | cds-NP_010641.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:185612-186754:+ | gene-YDR354W_ZTW1 | rna-NM_001180662.3_ZTW1 | cds-NP_010641.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1136697-1137839:+ | gene-YDR354W_Sparadoxus | rna-NM_001180662.3_Sparadoxus | cds-NP_010641.3_Sparadoxus | 89.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |