Gene name: TRP3
Reference locus (S288C): YKL211C
Gene biotype: protein_coding
Description: Multifunctional tryptophan biosynthesis protein; Indole-3-glycerol-phosphate synthase; forms bifunctional hetero-oligomeric anthranilate synthase:indole-3-glycerol phosphate synthase enzyme complex with Trp2p
Top 10 interactors (score): TRP5 (0.999); TRP2 (0.999); TRP1 (0.999); TRP4 (0.999); ARO7 (0.997); ABZ1 (0.997); ARO2 (0.996); HIS7 (0.996); HIS4 (0.993); PHA2 (0.973); ARO1 (0.969); HIS6 (0.957); TYR1 (0.955); ARG5,6 (0.947); HIS5 (0.942); ABZ2 (0.939); HIS3 (0.935); ADE6 (0.934); ARO3 (0.932); GOT1 (0.927)
Homologues (species, bitscore): GMPS (Homo sapiens, 61.2); Gmps (Mus musculus, 62.8); gmps (Danio rerio, 62.0); GMPS (Xenopus tropicalis, 68.6); bur (Drosophila melanogaster, 57.0); AT5G57890 (Arabidopsis thaliana, 171.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:22521-23975:- | gene-YKL211C_AKU4011 | rna-NM_001179776.1_AKU4011 | cds-NP_012711.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:107-1561:- | gene-YKL211C_BG1 | rna-NM_001179776.1_BG1 | cds-NP_012711.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:40681-42135:- | gene-YKL211C_Bruggeman | rna-NM_001179776.1_Bruggeman | cds-NP_012711.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:35381-36835:- | gene-YKL211C_CAT1 | rna-NM_001179776.1_CAT1 | cds-NP_012711.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:34531-35985:- | gene-YKL211C_CBS1585 | rna-NM_001179776.1_CBS1585 | cds-NP_012711.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:34228-35682:- | gene-YKL211C_CBS436 | rna-NM_001179776.1_CBS436 | cds-NP_012711.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:20476-21773:- | gene-YKL211C_CBS6412 | rna-NM_001179776.1_CBS6412 | cds-NP_012711.1_CBS6412 | 86.5 | 88.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:35168-36622:- | gene-YKL211C_CBS6413 | rna-NM_001179776.1_CBS6413 | cds-NP_012711.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:36477-37931:- | gene-YKL211C_CENPK1137D | rna-NM_001179776.1_CENPK1137D | cds-NP_012711.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:34474-35928:- | gene-YKL211C_EthanolRed | rna-NM_001179776.1_EthanolRed | cds-NP_012711.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:34533-35987:- | gene-YKL211C_FaliES1 | rna-NM_001179776.1_FaliES1 | cds-NP_012711.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:34163-35617:- | gene-YKL211C_JAY291 | rna-NM_001179776.1_JAY291 | cds-NP_012711.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:42734-44188:- | gene-YKL211C_MUCL30387 | rna-NM_001179776.1_MUCL30387 | cds-NP_012711.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:37063-38517:- | gene-YKL211C_MUCL30388 | rna-NM_001179776.1_MUCL30388 | cds-NP_012711.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:34590-36044:- | gene-YKL211C_MUCL39482 | rna-NM_001179776.1_MUCL39482 | cds-NP_012711.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:38369-39823:- | gene-YKL211C_MUCL42920 | rna-NM_001179776.1_MUCL42920 | cds-NP_012711.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:36688-38142:- | gene-YKL211C_NCIM3186 | rna-NM_001179776.1_NCIM3186 | cds-NP_012711.1_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:34612-36066:- | gene-YKL211C_NCYC1407 | rna-NM_001179776.1_NCYC1407 | cds-NP_012711.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:42798-44252:- | gene-YKL211C_PE2H3 | rna-NM_001179776.1_PE2H3 | cds-NP_012711.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:38996-40450:- | gene-YKL211C_PE2H4 | rna-NM_001179776.1_PE2H4 | cds-NP_012711.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:36699-38153:- | gene-YKL211C_S288C | rna-NM_001179776.1_S288C | cds-NP_012711.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000092.1:29727-31181:+ | gene-YKL211C_SA1 | rna-NM_001179776.1_SA1 | cds-NP_012711.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:35281-36735:- | gene-YKL211C_ThermosaccDry | rna-NM_001179776.1_ThermosaccDry | cds-NP_012711.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:34407-35861:- | gene-YKL211C_VR1 | rna-NM_001179776.1_VR1 | cds-NP_012711.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:34214-35668:- | gene-YKL211C_ZTW1 | rna-NM_001179776.1_ZTW1 | cds-NP_012711.1_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:42953-44407:- | gene-YKL211C_Sparadoxus | rna-NM_001179776.1_Sparadoxus | cds-NP_012711.1_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |