Gene name: TRK1
Reference locus (S288C): YJL129C
Gene biotype: protein_coding
Description: Component of the Trk1p-Trk2p potassium transport system; 180 kDa high affinity potassium transporter; phosphorylated in vivo and interacts physically with the phosphatase Ppz1p, suggesting Trk1p acitivy is regulated by phosphorylation; TRK1 has a paralog, TRK2, that arose from the whole genome duplication
Top 10 interactors (score): PPZ1 (0.972); TOK1 (0.968); NHA1 (0.961); PPZ2 (0.929); TRK2 (0.923); SAT4 (0.919); KHA1 (0.918); ENA1 (0.911); SIS2 (0.904); NHX1 (0.9); KCH1 (0.899); PRM6 (0.891); PMA1 (0.879); HAL5 (0.868); SKY1 (0.82); VNX1 (0.817); HAL1 (0.774); PHO89 (0.729); CCH1 (0.702); YLH47 (0.699)
Homologues (species, bitscore): HKT1 (Arabidopsis thaliana, 114.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:161891-165613:- | gene-YJL129C_AKU4011 | rna-NM_001181562.1_AKU4011 | cds-NP_012406.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:448117-451824:+ | gene-YJL129C_BG1 | rna-NM_001181562.1_BG1 | cds-NP_012406.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:173977-177684:- | gene-YJL129C_Bruggeman | rna-NM_001181562.1_Bruggeman | cds-NP_012406.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:177766-181473:- | gene-YJL129C_CAT1 | rna-NM_001181562.1_CAT1 | cds-NP_012406.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:167525-171247:- | gene-YJL129C_CBS1585 | rna-NM_001181562.1_CBS1585 | cds-NP_012406.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:192277-195984:- | gene-YJL129C_CBS436 | rna-NM_001181562.1_CBS436 | cds-NP_012406.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:163544-167266:- | gene-YJL129C_CBS6412 | rna-NM_001181562.1_CBS6412 | cds-NP_012406.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:165000-168722:- | gene-YJL129C_CBS6413 | rna-NM_001181562.1_CBS6413 | cds-NP_012406.1_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:156068-159778:- | gene-YJL129C_CENPK1137D | rna-NM_001181562.1_CENPK1137D | cds-NP_012406.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:165875-169585:- | gene-YJL129C_EthanolRed | rna-NM_001181562.1_EthanolRed | cds-NP_012406.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:171527-175237:- | gene-YJL129C_FaliES1 | rna-NM_001181562.1_FaliES1 | cds-NP_012406.1_FaliES1 | 99.2 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000099.1:52709-56412:- | gene-YJL129C_JAY291 | rna-NM_001181562.1_JAY291 | cds-NP_012406.1_JAY291 | 99.7 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:176244-179951:- | gene-YJL129C_MUCL30387 | rna-NM_001181562.1_MUCL30387 | cds-NP_012406.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:172296-176003:- | gene-YJL129C_MUCL30388 | rna-NM_001181562.1_MUCL30388 | cds-NP_012406.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:166473-170195:- | gene-YJL129C_MUCL39482 | rna-NM_001181562.1_MUCL39482 | cds-NP_012406.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:172290-175997:- | gene-YJL129C_MUCL42920 | rna-NM_001181562.1_MUCL42920 | cds-NP_012406.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:173578-177285:- | gene-YJL129C_NCIM3186 | rna-NM_001181562.1_NCIM3186 | cds-NP_012406.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:164880-168602:- | gene-YJL129C_NCYC1407 | rna-NM_001181562.1_NCYC1407 | cds-NP_012406.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:177686-181393:- | gene-YJL129C_PE2H3 | rna-NM_001181562.1_PE2H3 | cds-NP_012406.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:177330-181037:- | gene-YJL129C_PE2H4 | rna-NM_001181562.1_PE2H4 | cds-NP_012406.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:173599-177306:- | gene-YJL129C_S288C | rna-NM_001181562.1_S288C | cds-NP_012406.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000085.1:21864-25571:+ | gene-YJL129C_SA1 | rna-NM_001181562.1_SA1 | cds-NP_012406.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:164718-168428:- | gene-YJL129C_ThermosaccDry | rna-NM_001181562.1_ThermosaccDry | cds-NP_012406.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:171803-175510:- | gene-YJL129C_VR1 | rna-NM_001181562.1_VR1 | cds-NP_012406.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:152009-155716:- | gene-YJL129C_ZTW1 | rna-NM_001181562.1_ZTW1 | cds-NP_012406.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:177255-180929:- | gene-YJL129C_Sparadoxus | rna-NM_001181562.1_Sparadoxus | cds-NP_012406.1_Sparadoxus | 88.7 | 99.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |