Gene name: TPO5
Reference locus (S288C): YKL174C
Gene biotype: protein_coding
Description: Polyamine transporter TPO5; Protein involved in excretion of putrescine and spermidine; putative polyamine transporter in the Golgi or post-Golgi vesicles
Top 10 interactors (score): YAR028W (0.813); MST28 (0.788); TPO1 (0.778); DUR3 (0.767); SAM3 (0.744); ENV10 (0.72); UIP3 (0.698); YCR007C (0.692); MST27 (0.681); SLY41 (0.621); PML1 (0.572); YCT1 (0.563); TPO2 (0.548); TPO3 (0.541); QDR3 (0.54); GET2 (0.524); OPI3 (0.522); CHO2 (0.521); CHO1 (0.497); QDR2 (0.497)
Homologues (species, bitscore): GABP (Arabidopsis thaliana, 147.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:107235-109091:- | gene-YKL174C_AKU4011 | rna-NM_001179740.1_AKU4011 | cds-NP_012747.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:83792-85648:- | gene-YKL174C_BG1 | rna-NM_001179740.1_BG1 | cds-NP_012747.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:124625-126481:- | gene-YKL174C_Bruggeman | rna-NM_001179740.1_Bruggeman | cds-NP_012747.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:119587-121443:- | gene-YKL174C_CAT1 | rna-NM_001179740.1_CAT1 | cds-NP_012747.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:119219-121075:- | gene-YKL174C_CBS1585 | rna-NM_001179740.1_CBS1585 | cds-NP_012747.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:117983-119839:- | gene-YKL174C_CBS436 | rna-NM_001179740.1_CBS436 | cds-NP_012747.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:104809-106665:- | gene-YKL174C_CBS6412 | rna-NM_001179740.1_CBS6412 | cds-NP_012747.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:119935-121791:- | gene-YKL174C_CBS6413 | rna-NM_001179740.1_CBS6413 | cds-NP_012747.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:120206-122062:- | gene-YKL174C_CENPK1137D | rna-NM_001179740.1_CENPK1137D | cds-NP_012747.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:118121-119977:- | gene-YKL174C_EthanolRed | rna-NM_001179740.1_EthanolRed | cds-NP_012747.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:118822-120678:- | gene-YKL174C_FaliES1 | rna-NM_001179740.1_FaliES1 | cds-NP_012747.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:117805-119661:- | gene-YKL174C_JAY291 | rna-NM_001179740.1_JAY291 | cds-NP_012747.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:126925-128781:- | gene-YKL174C_MUCL30387 | rna-NM_001179740.1_MUCL30387 | cds-NP_012747.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:121269-123125:- | gene-YKL174C_MUCL30388 | rna-NM_001179740.1_MUCL30388 | cds-NP_012747.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:119274-121130:- | gene-YKL174C_MUCL39482 | rna-NM_001179740.1_MUCL39482 | cds-NP_012747.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:123609-125465:- | gene-YKL174C_MUCL42920 | rna-NM_001179740.1_MUCL42920 | cds-NP_012747.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:120369-122225:- | gene-YKL174C_NCIM3186 | rna-NM_001179740.1_NCIM3186 | cds-NP_012747.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:119298-121154:- | gene-YKL174C_NCYC1407 | rna-NM_001179740.1_NCYC1407 | cds-NP_012747.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:126358-128214:- | gene-YKL174C_PE2H3 | rna-NM_001179740.1_PE2H3 | cds-NP_012747.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:122652-124508:- | gene-YKL174C_PE2H4 | rna-NM_001179740.1_PE2H4 | cds-NP_012747.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:120380-122236:- | gene-YKL174C_S288C | rna-NM_001179740.1_S288C | cds-NP_012747.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:36586-38442:- | gene-YKL174C_SA1 | rna-NM_001179740.1_SA1 | cds-NP_012747.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:119522-121378:- | gene-YKL174C_ThermosaccDry | rna-NM_001179740.1_ThermosaccDry | cds-NP_012747.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:118063-119919:- | gene-YKL174C_VR1 | rna-NM_001179740.1_VR1 | cds-NP_012747.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:117932-119788:- | gene-YKL174C_ZTW1 | rna-NM_001179740.1_ZTW1 | cds-NP_012747.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:132455-134311:- | gene-YKL174C_Sparadoxus | rna-NM_001179740.1_Sparadoxus | cds-NP_012747.1_Sparadoxus | 89.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |