Gene name: TPO4
Reference locus (S288C): YOR273C
Gene biotype: protein_coding
Description: Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; recognizes spermine, putrescine, and spermidine; localizes to the plasma membrane; Belongs to the major facilitator superfamily. DHA1 family. Polyamines/proton antiporter (TC 2.A.1.2.16) subfamily
Top 10 interactors (score): YML079W (0.713); ATR1 (0.696); PDR11 (0.668); YOR1 (0.664); SGE1 (0.651); COS3 (0.617); PDR3 (0.615); DUR3 (0.613); SNQ2 (0.613); THI72 (0.612); UGA4 (0.612); PDR5 (0.592); PDR15 (0.59); AZR1 (0.59); PDR18 (0.585); HSP42 (0.577); EHT1 (0.576); RTA1 (0.571); YFL064C (0.568); CSS3 (0.568)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:825262-827241:- | gene-YOR273C_AKU4011 | rna-NM_001183692.1_AKU4011 | cds-NP_014916.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:227226-229205:- | gene-YOR273C_BG1 | rna-NM_001183692.1_BG1 | cds-NP_014916.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:810696-812675:- | gene-YOR273C_Bruggeman | rna-NM_001183692.1_Bruggeman | cds-NP_014916.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:811367-813346:- | gene-YOR273C_CAT1 | rna-NM_001183692.1_CAT1 | cds-NP_014916.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:808280-810259:- | gene-YOR273C_CBS1585 | rna-NM_001183692.1_CBS1585 | cds-NP_014916.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:806928-808907:- | gene-YOR273C_CBS436 | rna-NM_001183692.1_CBS436 | cds-NP_014916.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:805133-807112:- | gene-YOR273C_CBS6412 | rna-NM_001183692.1_CBS6412 | cds-NP_014916.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:813991-815970:- | gene-YOR273C_CBS6413 | rna-NM_001183692.1_CBS6413 | cds-NP_014916.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:834222-836201:- | gene-YOR273C_CENPK1137D | rna-NM_001183692.1_CENPK1137D | cds-NP_014916.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:801389-803368:- | gene-YOR273C_EthanolRed | rna-NM_001183692.1_EthanolRed | cds-NP_014916.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:806788-808767:- | gene-YOR273C_FaliES1 | rna-NM_001183692.1_FaliES1 | cds-NP_014916.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:18148-20127:+ | gene-YOR273C_JAY291 | rna-NM_001183692.1_JAY291 | cds-NP_014916.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:814933-816912:- | gene-YOR273C_MUCL30387 | rna-NM_001183692.1_MUCL30387 | cds-NP_014916.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:822910-824889:- | gene-YOR273C_MUCL30388 | rna-NM_001183692.1_MUCL30388 | cds-NP_014916.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:815626-817605:- | gene-YOR273C_MUCL39482 | rna-NM_001183692.1_MUCL39482 | cds-NP_014916.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:825112-827091:- | gene-YOR273C_MUCL42920 | rna-NM_001183692.1_MUCL42920 | cds-NP_014916.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:834341-836320:- | gene-YOR273C_NCIM3186 | rna-NM_001183692.1_NCIM3186 | cds-NP_014916.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:815831-817810:- | gene-YOR273C_NCYC1407 | rna-NM_001183692.1_NCYC1407 | cds-NP_014916.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:814908-816887:- | gene-YOR273C_PE2H3 | rna-NM_001183692.1_PE2H3 | cds-NP_014916.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:825285-827264:- | gene-YOR273C_PE2H4 | rna-NM_001183692.1_PE2H4 | cds-NP_014916.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:834452-836431:- | gene-YOR273C_S288C | rna-NM_001183692.1_S288C | cds-NP_014916.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:244469-246448:- | gene-YOR273C_SA1 | rna-NM_001183692.1_SA1 | cds-NP_014916.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:805971-807950:- | gene-YOR273C_ThermosaccDry | rna-NM_001183692.1_ThermosaccDry | cds-NP_014916.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:869348-871327:- | gene-YOR273C_VR1 | rna-NM_001183692.1_VR1 | cds-NP_014916.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:538859-540838:- | gene-YOR273C_ZTW1 | rna-NM_001183692.1_ZTW1 | cds-NP_014916.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:811614-813593:- | gene-YOR273C_Sparadoxus | rna-NM_001183692.1_Sparadoxus | cds-NP_014916.1_Sparadoxus | 89.7 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |