Gene name: TPO3
Reference locus (S288C): YPR156C
Gene biotype: protein_coding
Description: Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to the plasma membrane; TPO3 has a paralog, TPO2, that arose from the whole genome duplication; Belongs to the major facilitator superfamily. DHA1 family. Polyamines/proton antiporter (TC 2.A.1.2.16) subfamily
Top 10 interactors (score): TPO2 (0.999); HAA1 (0.942); QDR2 (0.914); TDA6 (0.904); HRK1 (0.752); PDR12 (0.75); YRO2 (0.715); YGP1 (0.712); YDR239C (0.698); AZR1 (0.696); FPS1 (0.694); STP4 (0.677); PDR16 (0.673); YLR297W (0.663); SNQ2 (0.643); MSN4 (0.617); SAP30 (0.616); COM2 (0.581); PDR1 (0.572); SPI1 (0.571)
Homologues (species, bitscore): TMT3 (Arabidopsis thaliana, 50.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:804060-805927:- | gene-YPR156C_AKU4011 | rna-NM_001184253.1_AKU4011 | cds-NP_015482.1_AKU4011 | 56.3 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:91450-93318:+ | gene-YPR156C_BG1 | rna-NM_001184253.1_BG1 | cds-NP_015482.1_BG1 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:884602-886463:- | gene-YPR156C_Bruggeman | rna-NM_001184253.1_Bruggeman | cds-NP_015482.1_Bruggeman | 93.7 | 97.5 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:926623-928490:- | gene-YPR156C_CAT1 | rna-NM_001184253.1_CAT1 | cds-NP_015482.1_CAT1 | 69.7 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:808298-810165:- | gene-YPR156C_CBS1585 | rna-NM_001184253.1_CBS1585 | cds-NP_015482.1_CBS1585 | 67.7 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:822407-824274:- | gene-YPR156C_CBS436 | rna-NM_001184253.1_CBS436 | cds-NP_015482.1_CBS436 | 71.2 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:811047-812567:- | gene-YPR156C_CBS6412 | rna-NM_001184253.1_CBS6412 | cds-NP_015482.1_CBS6412 | 79.9 | 81.3 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:805760-807627:- | gene-YPR156C_CBS6413 | rna-NM_001184253.1_CBS6413 | cds-NP_015482.1_CBS6413 | 56.3 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:837902-839790:- | gene-YPR156C_CENPK1137D | rna-NM_001184253.1_CENPK1137D | cds-NP_015482.1_CENPK1137D | 69.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1126195-1127887:- | gene-YPR156C_EthanolRed | rna-NM_001184253.1_EthanolRed | cds-NP_015482.1_EthanolRed | 89.0 | 90.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:805742-807610:- | gene-YPR156C_FaliES1 | rna-NM_001184253.1_FaliES1 | cds-NP_015482.1_FaliES1 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000251.1:3-700:- | gene-YPR156C_JAY291 | rna-NM_001184253.1_JAY291 | cds-NP_015482.1_JAY291 | 37.0 | 37.3 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:852680-854551:- | gene-YPR156C_MUCL30387 | rna-NM_001184253.1_MUCL30387 | cds-NP_015482.1_MUCL30387 | 98.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:825264-827131:- | gene-YPR156C_MUCL30388 | rna-NM_001184253.1_MUCL30388 | cds-NP_015482.1_MUCL30388 | 72.1 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:801066-802927:- | gene-YPR156C_MUCL39482 | rna-NM_001184253.1_MUCL39482 | cds-NP_015482.1_MUCL39482 | 96.3 | 99.1 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:865068-866935:- | gene-YPR156C_MUCL42920 | rna-NM_001184253.1_MUCL42920 | cds-NP_015482.1_MUCL42920 | 61.6 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:837892-839760:- | gene-YPR156C_NCIM3186 | rna-NM_001184253.1_NCIM3186 | cds-NP_015482.1_NCIM3186 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:809410-811277:- | gene-YPR156C_NCYC1407 | rna-NM_001184253.1_NCYC1407 | cds-NP_015482.1_NCYC1407 | 56.3 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:816126-817994:- | gene-YPR156C_PE2H3 | rna-NM_001184253.1_PE2H3 | cds-NP_015482.1_PE2H3 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:815774-817642:- | gene-YPR156C_PE2H4 | rna-NM_001184253.1_PE2H4 | cds-NP_015482.1_PE2H4 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:837909-839777:- | gene-YPR156C_S288C | rna-NM_001184253.1_S288C | cds-NP_015482.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000060.1:74175-74927:+ | gene-YPR156C_SA1 | rna-NM_001184253.1_SA1 | cds-NP_015482.1_SA1 | 40.2 | 40.2 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:805184-807301:- | gene-YPR156C_ThermosaccDry | rna-NM_001184253.1_ThermosaccDry | cds-NP_015482.1_ThermosaccDry | 86.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:827626-829493:- | gene-YPR156C_VR1 | rna-NM_001184253.1_VR1 | cds-NP_015482.1_VR1 | 73.9 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:808558-810426:- | gene-YPR156C_ZTW1 | rna-NM_001184253.1_ZTW1 | cds-NP_015482.1_ZTW1 | 98.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:810527-812395:- | gene-YPR156C_Sparadoxus | rna-NM_001184253.1_Sparadoxus | cds-NP_015482.1_Sparadoxus | 91.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |