Gene name: TPC1
Reference locus (S288C): YGR096W
Gene biotype: protein_coding
Description: Mitochondrial thiamine pyrophosphate carrier 1; Mitochondrial membrane transporter; mediates uptake of the essential cofactor thiamine pyrophosphate (ThPP) into mitochondria; expression appears to be regulated by carbon source; member of the mitochondrial carrier family
Top 10 interactors (score): NIT3 (0.746); PTH2 (0.676); BOL1 (0.655); LIP5 (0.651); AIM22 (0.643); NFU1 (0.622); MIC26 (0.615); CBR1 (0.605); LIP2 (0.603); PDA1 (0.584); THI80 (0.583); UTP6 (0.577); CBT1 (0.575); ADP1 (0.573); SOM1 (0.573); COX16 (0.571); YJR096W (0.57); OLA1 (0.568); MTQ2 (0.565); COX14 (0.564)
Homologues (species, bitscore): SLC25A19 (Homo sapiens, 129.0); Slc25a19 (Mus musculus, 132.5); slc25a19 (Danio rerio, 117.1); slc25a19 (Xenopus tropicalis, 125.6); Tpc1 (Drosophila melanogaster, 114.8); hpo-12 (Caenorhabditis elegans, 110.5); AT3G53940 (Arabidopsis thaliana, 126.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:660802-661746:+ | gene-YGR096W_AKU4011 | rna-NM_001181225.3_AKU4011 | cds-NP_011610.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000173.1:96610-97554:+ | gene-YGR096W_BG1 | rna-NM_001181225.3_BG1 | cds-NP_011610.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:662993-663937:+ | gene-YGR096W_Bruggeman | rna-NM_001181225.3_Bruggeman | cds-NP_011610.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:661183-662127:+ | gene-YGR096W_CAT1 | rna-NM_001181225.3_CAT1 | cds-NP_011610.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:661766-662710:+ | gene-YGR096W_CBS1585 | rna-NM_001181225.3_CBS1585 | cds-NP_011610.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:663426-664370:+ | gene-YGR096W_CBS436 | rna-NM_001181225.3_CBS436 | cds-NP_011610.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:653459-654403:+ | gene-YGR096W_CBS6412 | rna-NM_001181225.3_CBS6412 | cds-NP_011610.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:658401-659345:+ | gene-YGR096W_CBS6413 | rna-NM_001181225.3_CBS6413 | cds-NP_011610.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:676298-677242:+ | gene-YGR096W_CENPK1137D | rna-NM_001181225.3_CENPK1137D | cds-NP_011610.3_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:648354-649298:+ | gene-YGR096W_EthanolRed | rna-NM_001181225.3_EthanolRed | cds-NP_011610.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:652199-653143:+ | gene-YGR096W_FaliES1 | rna-NM_001181225.3_FaliES1 | cds-NP_011610.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000396.1:23412-24356:- | gene-YGR096W_JAY291 | rna-NM_001181225.3_JAY291 | cds-NP_011610.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:659981-660925:+ | gene-YGR096W_MUCL30387 | rna-NM_001181225.3_MUCL30387 | cds-NP_011610.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:662793-663737:+ | gene-YGR096W_MUCL30388 | rna-NM_001181225.3_MUCL30388 | cds-NP_011610.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:657494-658438:+ | gene-YGR096W_MUCL39482 | rna-NM_001181225.3_MUCL39482 | cds-NP_011610.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:667805-668749:+ | gene-YGR096W_MUCL42920 | rna-NM_001181225.3_MUCL42920 | cds-NP_011610.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:676621-677565:+ | gene-YGR096W_NCIM3186 | rna-NM_001181225.3_NCIM3186 | cds-NP_011610.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:652183-653127:+ | gene-YGR096W_NCYC1407 | rna-NM_001181225.3_NCYC1407 | cds-NP_011610.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:654873-655817:+ | gene-YGR096W_PE2H3 | rna-NM_001181225.3_PE2H3 | cds-NP_011610.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:659991-660935:+ | gene-YGR096W_PE2H4 | rna-NM_001181225.3_PE2H4 | cds-NP_011610.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:676621-677565:+ | gene-YGR096W_S288C | rna-NM_001181225.3_S288C | cds-NP_011610.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:103195-104139:+ | gene-YGR096W_SA1 | rna-NM_001181225.3_SA1 | cds-NP_011610.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:672569-673513:+ | gene-YGR096W_ThermosaccDry | rna-NM_001181225.3_ThermosaccDry | cds-NP_011610.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:769061-770005:+ | gene-YGR096W_VR1 | rna-NM_001181225.3_VR1 | cds-NP_011610.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:126820-127764:+ | gene-YGR096W_ZTW1 | rna-NM_001181225.3_ZTW1 | cds-NP_011610.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:662620-663564:+ | gene-YGR096W_Sparadoxus | rna-NM_001181225.3_Sparadoxus | cds-NP_011610.3_Sparadoxus | 91.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |