Gene name: TOM71
Reference locus (S288C): YHR117W
Gene biotype: protein_coding
Description: Protein TOM71; Mitochondrial outer membrane protein; probable minor component of the TOM (translocase of outer membrane) complex responsible for recognition and import of mitochondrially directed proteins; TOM71 has a paralog, TOM70, that arose from the whole genome duplication
Top 10 interactors (score): HSP82 (0.97); TOM20 (0.969); SSA1 (0.967); LAM6 (0.961); TOM22 (0.953); TOM40 (0.934); HSC82 (0.933); TOM7 (0.923); MFB1 (0.881); SSA2 (0.878); MDM10 (0.873); SAM50 (0.867); TIM9 (0.865); TIM50 (0.849); TIM10 (0.844); TIM8 (0.826); SAM37 (0.779); TIM44 (0.778); FIS1 (0.775); TIM13 (0.764)
Homologues (species, bitscore): TOMM70A (Homo sapiens, 137.1); Tomm70a (Mus musculus, 127.9); tomm70a (Danio rerio, 134.4); tomm70a (Xenopus tropicalis, 138.3); Tom70 (Drosophila melanogaster, 119.0); ogt-1 (Caenorhabditis elegans, 58.9); TPR13 (Arabidopsis thaliana, 74.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:329275-331194:+ | gene-YHR117W_AKU4011 | rna-NM_001179247.1_AKU4011 | cds-NP_011985.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:186680-188599:- | gene-YHR117W_BG1 | rna-NM_001179247.1_BG1 | cds-NP_011985.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:336565-338484:+ | gene-YHR117W_Bruggeman | rna-NM_001179247.1_Bruggeman | cds-NP_011985.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:331703-333622:+ | gene-YHR117W_CAT1 | rna-NM_001179247.1_CAT1 | cds-NP_011985.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:328299-330218:+ | gene-YHR117W_CBS1585 | rna-NM_001179247.1_CBS1585 | cds-NP_011985.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:325657-327576:+ | gene-YHR117W_CBS436 | rna-NM_001179247.1_CBS436 | cds-NP_011985.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:329737-331656:+ | gene-YHR117W_CBS6412 | rna-NM_001179247.1_CBS6412 | cds-NP_011985.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:329326-331245:+ | gene-YHR117W_CBS6413 | rna-NM_001179247.1_CBS6413 | cds-NP_011985.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:335523-337442:+ | gene-YHR117W_CENPK1137D | rna-NM_001179247.1_CENPK1137D | cds-NP_011985.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:388180-390099:+ | gene-YHR117W_EthanolRed | rna-NM_001179247.1_EthanolRed | cds-NP_011985.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:329668-331587:+ | gene-YHR117W_FaliES1 | rna-NM_001179247.1_FaliES1 | cds-NP_011985.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000139.1:2284-4203:+ | gene-YHR117W_JAY291 | rna-NM_001179247.1_JAY291 | cds-NP_011985.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:336293-338212:+ | gene-YHR117W_MUCL30387 | rna-NM_001179247.1_MUCL30387 | cds-NP_011985.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:335940-337859:+ | gene-YHR117W_MUCL30388 | rna-NM_001179247.1_MUCL30388 | cds-NP_011985.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:328638-330557:+ | gene-YHR117W_MUCL39482 | rna-NM_001179247.1_MUCL39482 | cds-NP_011985.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:334878-336797:+ | gene-YHR117W_MUCL42920 | rna-NM_001179247.1_MUCL42920 | cds-NP_011985.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:342231-344150:+ | gene-YHR117W_NCIM3186 | rna-NM_001179247.1_NCIM3186 | cds-NP_011985.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:330848-332767:+ | gene-YHR117W_NCYC1407 | rna-NM_001179247.1_NCYC1407 | cds-NP_011985.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:330300-332219:+ | gene-YHR117W_PE2H3 | rna-NM_001179247.1_PE2H3 | cds-NP_011985.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:337727-339646:+ | gene-YHR117W_PE2H4 | rna-NM_001179247.1_PE2H4 | cds-NP_011985.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:342349-344268:+ | gene-YHR117W_S288C | rna-NM_001179247.1_S288C | cds-NP_011985.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:14704-16623:- | gene-YHR117W_SA1 | rna-NM_001179247.1_SA1 | cds-NP_011985.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:330751-332670:+ | gene-YHR117W_ThermosaccDry | rna-NM_001179247.1_ThermosaccDry | cds-NP_011985.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:338372-340291:+ | gene-YHR117W_VR1 | rna-NM_001179247.1_VR1 | cds-NP_011985.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:321762-323681:+ | gene-YHR117W_ZTW1 | rna-NM_001179247.1_ZTW1 | cds-NP_011985.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:327445-329349:+ | gene-YHR117W_Sparadoxus | rna-NM_001179247.1_Sparadoxus | cds-NP_011985.1_Sparadoxus | 87.5 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |