Gene name: TOM40
Reference locus (S288C): YMR203W
Gene biotype: protein_coding
Description: Mitochondrial import receptor subunit TOM40; Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; constitutes the core element of the protein conducting pore; pre-Tom40p is phosphorylated by PKA, which impairs its import into mitochondria under non-respiratory conditions
Top 10 interactors (score): SAM37 (0.999); TOM7 (0.999); SAM50 (0.999); TOM5 (0.999); TOM20 (0.999); MDM10 (0.999); TOM70 (0.999); TIM50 (0.999); TOM22 (0.999); TIM17 (0.999); POR1 (0.999); SAM35 (0.998); TIM13 (0.997); TIM8 (0.996); TOM6 (0.995); TIM44 (0.995); TIM23 (0.994); TIM10 (0.992); TIM22 (0.991); HSP60 (0.991)
Homologues (species, bitscore): TOMM40L (Homo sapiens, 82.8); Tomm40l (Mus musculus, 87.4); tomm40l (Danio rerio, 85.9); TOMM40L (Xenopus tropicalis, 76.3); Tom40 (Drosophila melanogaster, 105.9); tomm-40 (Caenorhabditis elegans, 60.1); AT1G50400 (Arabidopsis thaliana, 98.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:708420-709583:+ | gene-YMR203W_AKU4011 | rna-NM_001182710.1_AKU4011 | cds-NP_013930.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:244964-246127:- | gene-YMR203W_BG1 | rna-NM_001182710.1_BG1 | cds-NP_013930.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:652631-653794:+ | gene-YMR203W_Bruggeman | rna-NM_001182710.1_Bruggeman | cds-NP_013930.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:655885-657048:+ | gene-YMR203W_CAT1 | rna-NM_001182710.1_CAT1 | cds-NP_013930.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:640677-641840:+ | gene-YMR203W_CBS1585 | rna-NM_001182710.1_CBS1585 | cds-NP_013930.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:644926-646089:+ | gene-YMR203W_CBS436 | rna-NM_001182710.1_CBS436 | cds-NP_013930.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:752234-753397:+ | gene-YMR203W_CBS6412 | rna-NM_001182710.1_CBS6412 | cds-NP_013930.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:639826-640989:+ | gene-YMR203W_CBS6413 | rna-NM_001182710.1_CBS6413 | cds-NP_013930.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:663178-664341:+ | gene-YMR203W_CENPK1137D | rna-NM_001182710.1_CENPK1137D | cds-NP_013930.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:700882-702045:+ | gene-YMR203W_EthanolRed | rna-NM_001182710.1_EthanolRed | cds-NP_013930.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:646536-647699:+ | gene-YMR203W_FaliES1 | rna-NM_001182710.1_FaliES1 | cds-NP_013930.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:138336-139499:- | gene-YMR203W_JAY291 | rna-NM_001182710.1_JAY291 | cds-NP_013930.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:646178-647341:+ | gene-YMR203W_MUCL30387 | rna-NM_001182710.1_MUCL30387 | cds-NP_013930.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:652954-654117:+ | gene-YMR203W_MUCL30388 | rna-NM_001182710.1_MUCL30388 | cds-NP_013930.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:641747-642910:+ | gene-YMR203W_MUCL39482 | rna-NM_001182710.1_MUCL39482 | cds-NP_013930.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:649073-650236:+ | gene-YMR203W_MUCL42920 | rna-NM_001182710.1_MUCL42920 | cds-NP_013930.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:668446-669609:+ | gene-YMR203W_NCIM3186 | rna-NM_001182710.1_NCIM3186 | cds-NP_013930.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:641399-642562:+ | gene-YMR203W_NCYC1407 | rna-NM_001182710.1_NCYC1407 | cds-NP_013930.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:651244-652407:+ | gene-YMR203W_PE2H3 | rna-NM_001182710.1_PE2H3 | cds-NP_013930.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:652258-653421:+ | gene-YMR203W_PE2H4 | rna-NM_001182710.1_PE2H4 | cds-NP_013930.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:668492-669655:+ | gene-YMR203W_S288C | rna-NM_001182710.1_S288C | cds-NP_013930.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:138455-139618:- | gene-YMR203W_SA1 | rna-NM_001182710.1_SA1 | cds-NP_013930.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:642707-643870:+ | gene-YMR203W_ThermosaccDry | rna-NM_001182710.1_ThermosaccDry | cds-NP_013930.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:655776-656939:+ | gene-YMR203W_VR1 | rna-NM_001182710.1_VR1 | cds-NP_013930.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:58409-59572:+ | gene-YMR203W_ZTW1 | rna-NM_001182710.1_ZTW1 | cds-NP_013930.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:660521-661684:+ | gene-YMR203W_Sparadoxus | rna-NM_001182710.1_Sparadoxus | cds-NP_013930.1_Sparadoxus | 94.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |