TOK1 (YJL093C)


Gene profile

Gene name: TOK1
Reference locus (S288C): YJL093C
Gene biotype: protein_coding

Description: Outward-rectifier potassium channel of the plasma membrane; has two pore domains in tandem, each of which forms a functional channel permeable to potassium; carboxy tail functions to prevent inner gate closures; target of K1 toxin

Top 10 interactors (score): TRK1 (0.968); NHA1 (0.956); TRK2 (0.956); KHA1 (0.93); ENA1 (0.923); CCH1 (0.83); NHX1 (0.794); YPK1 (0.78); KSP1 (0.78); HAL1 (0.772); VNX1 (0.759); YLH47 (0.717); PHO89 (0.712); KRE1 (0.711); PMA1 (0.705); SIS2 (0.65); YIL029C (0.65); HOG1 (0.642); PMP3 (0.611); PAM1 (0.597)

Homologues (species, bitscore): KCNK10 (Homo sapiens, 71.2); Kcnk10 (Mus musculus, 70.9); LOC563228 (Danio rerio, 67.4); kcnk10 (Xenopus tropicalis, 70.1); Task6 (Drosophila melanogaster, 61.6); twk-40 (Caenorhabditis elegans, 70.1); KCO5 (Arabidopsis thaliana, 69.3)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:237458-239533:- gene-YJL093C_AKU4011 rna-NM_001181526.1_AKU4011 cds-NP_012442.1_AKU4011 99.7 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:374921-376996:+ gene-YJL093C_BG1 rna-NM_001181526.1_BG1 cds-NP_012442.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:248902-250977:- gene-YJL093C_Bruggeman rna-NM_001181526.1_Bruggeman cds-NP_012442.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:253798-255873:- gene-YJL093C_CAT1 rna-NM_001181526.1_CAT1 cds-NP_012442.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:249119-251194:- gene-YJL093C_CBS1585 rna-NM_001181526.1_CBS1585 cds-NP_012442.1_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:267226-269301:- gene-YJL093C_CBS436 rna-NM_001181526.1_CBS436 cds-NP_012442.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:238216-240291:- gene-YJL093C_CBS6412 rna-NM_001181526.1_CBS6412 cds-NP_012442.1_CBS6412 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:239571-241646:- gene-YJL093C_CBS6413 rna-NM_001181526.1_CBS6413 cds-NP_012442.1_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:237208-239283:- gene-YJL093C_CENPK1137D rna-NM_001181526.1_CENPK1137D cds-NP_012442.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:241305-243380:- gene-YJL093C_EthanolRed rna-NM_001181526.1_EthanolRed cds-NP_012442.1_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:252882-254957:- gene-YJL093C_FaliES1 rna-NM_001181526.1_FaliES1 cds-NP_012442.1_FaliES1 99.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000138.1:50498-52573:- gene-YJL093C_JAY291 rna-NM_001181526.1_JAY291 cds-NP_012442.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:251172-253247:- gene-YJL093C_MUCL30387 rna-NM_001181526.1_MUCL30387 cds-NP_012442.1_MUCL30387 99.9 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:247247-249322:- gene-YJL093C_MUCL30388 rna-NM_001181526.1_MUCL30388 cds-NP_012442.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:241876-243951:- gene-YJL093C_MUCL39482 rna-NM_001181526.1_MUCL39482 cds-NP_012442.1_MUCL39482 99.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:248080-250155:- gene-YJL093C_MUCL42920 rna-NM_001181526.1_MUCL42920 cds-NP_012442.1_MUCL42920 99.9 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:254716-256791:- gene-YJL093C_NCIM3186 rna-NM_001181526.1_NCIM3186 cds-NP_012442.1_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:240564-242639:- gene-YJL093C_NCYC1407 rna-NM_001181526.1_NCYC1407 cds-NP_012442.1_NCYC1407 99.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:252924-254999:- gene-YJL093C_PE2H3 rna-NM_001181526.1_PE2H3 cds-NP_012442.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:252568-254643:- gene-YJL093C_PE2H4 rna-NM_001181526.1_PE2H4 cds-NP_012442.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:254737-256812:- gene-YJL093C_S288C rna-NM_001181526.1_S288C cds-NP_012442.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000003.1:50439-52514:- gene-YJL093C_SA1 rna-NM_001181526.1_SA1 cds-NP_012442.1_SA1 99.2 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:246291-248366:- gene-YJL093C_ThermosaccDry rna-NM_001181526.1_ThermosaccDry cds-NP_012442.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:247800-249875:- gene-YJL093C_VR1 rna-NM_001181526.1_VR1 cds-NP_012442.1_VR1 99.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:227652-229727:- gene-YJL093C_ZTW1 rna-NM_001181526.1_ZTW1 cds-NP_012442.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:251739-253814:- gene-YJL093C_Sparadoxus rna-NM_001181526.1_Sparadoxus cds-NP_012442.1_Sparadoxus 88.9 100.0 Verified 1 1 0 False False True False False

Additional files