Gene name: TOA2
Reference locus (S288C): YKL058W
Gene biotype: protein_coding
Description: TFIIA small subunit; involved in transcriptional activation, acts as antirepressor or as coactivator; required, along with Toa1p, for ribosomal protein gene transcription in vivo; homologous to smallest subunit of human and Drosophila TFIIA; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): SPT15 (0.999); TOA1 (0.999); SUA7 (0.998); TFA1 (0.996); TFG1 (0.996); RPB10 (0.995); TFA2 (0.995); SSL2 (0.994); RPO21 (0.994); RPB11 (0.993); TFG2 (0.988); TAF1 (0.987); TAF13 (0.98); RAD3 (0.977); RPB5 (0.977); NUT2 (0.977); RPB2 (0.975); RPB3 (0.973); RPO26 (0.972); TFB5 (0.971)
Homologues (species, bitscore): GTF2A2 (Homo sapiens, 88.6); Gtf2a2 (Mus musculus, 88.6); gtf2a2 (Danio rerio, 87.0); gtf2a2 (Xenopus tropicalis, 87.4); TfIIA-S (Drosophila melanogaster, 85.5); Y111B2A.13 (Caenorhabditis elegans, 75.5); AT4G24440 (Arabidopsis thaliana, 92.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:316141-316509:+ | gene-YKL058W_AKU4011 | rna-NM_001179624.1_AKU4011 | cds-NP_012865.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:327443-327811:- | gene-YKL058W_BG1 | rna-NM_001179624.1_BG1 | cds-NP_012865.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:335179-335547:+ | gene-YKL058W_Bruggeman | rna-NM_001179624.1_Bruggeman | cds-NP_012865.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:331617-331985:+ | gene-YKL058W_CAT1 | rna-NM_001179624.1_CAT1 | cds-NP_012865.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:328871-329239:+ | gene-YKL058W_CBS1585 | rna-NM_001179624.1_CBS1585 | cds-NP_012865.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:327025-327393:+ | gene-YKL058W_CBS436 | rna-NM_001179624.1_CBS436 | cds-NP_012865.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:313012-313380:+ | gene-YKL058W_CBS6412 | rna-NM_001179624.1_CBS6412 | cds-NP_012865.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:328837-329205:+ | gene-YKL058W_CBS6413 | rna-NM_001179624.1_CBS6413 | cds-NP_012865.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:329827-330195:+ | gene-YKL058W_CENPK1137D | rna-NM_001179624.1_CENPK1137D | cds-NP_012865.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:326844-327212:+ | gene-YKL058W_EthanolRed | rna-NM_001179624.1_EthanolRed | cds-NP_012865.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:327657-328025:+ | gene-YKL058W_FaliES1 | rna-NM_001179624.1_FaliES1 | cds-NP_012865.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000080.1:32587-32955:+ | gene-YKL058W_JAY291 | rna-NM_001179624.1_JAY291 | cds-NP_012865.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:336090-336458:+ | gene-YKL058W_MUCL30387 | rna-NM_001179624.1_MUCL30387 | cds-NP_012865.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:330989-331357:+ | gene-YKL058W_MUCL30388 | rna-NM_001179624.1_MUCL30388 | cds-NP_012865.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:328167-328535:+ | gene-YKL058W_MUCL39482 | rna-NM_001179624.1_MUCL39482 | cds-NP_012865.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:333077-333445:+ | gene-YKL058W_MUCL42920 | rna-NM_001179624.1_MUCL42920 | cds-NP_012865.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:330155-330523:+ | gene-YKL058W_NCIM3186 | rna-NM_001179624.1_NCIM3186 | cds-NP_012865.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:328364-328732:+ | gene-YKL058W_NCYC1407 | rna-NM_001179624.1_NCYC1407 | cds-NP_012865.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:352928-353296:+ | gene-YKL058W_PE2H3 | rna-NM_001179624.1_PE2H3 | cds-NP_012865.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:337668-338036:+ | gene-YKL058W_PE2H4 | rna-NM_001179624.1_PE2H4 | cds-NP_012865.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:330166-330534:+ | gene-YKL058W_S288C | rna-NM_001179624.1_S288C | cds-NP_012865.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:8164-8532:+ | gene-YKL058W_SA1 | rna-NM_001179624.1_SA1 | cds-NP_012865.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:328847-329215:+ | gene-YKL058W_ThermosaccDry | rna-NM_001179624.1_ThermosaccDry | cds-NP_012865.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:327993-328361:+ | gene-YKL058W_VR1 | rna-NM_001179624.1_VR1 | cds-NP_012865.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:326892-327260:+ | gene-YKL058W_ZTW1 | rna-NM_001179624.1_ZTW1 | cds-NP_012865.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:346086-346454:+ | gene-YKL058W_Sparadoxus | rna-NM_001179624.1_Sparadoxus | cds-NP_012865.1_Sparadoxus | 93.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |