Gene name: TOA1
Reference locus (S288C): YOR194C
Gene biotype: protein_coding
Description: TFIIA large subunit; involved in transcriptional activation, acts as antirepressor or as coactivator; required, along with Toa2p, for ribosomal protein gene transcription in vivo; homologous to largest and second largest subunits of human and Drosophila TFIIA; Belongs to the TFIIA subunit 1 family
Top 10 interactors (score): TOA2 (0.999); SPT15 (0.999); SUA7 (0.999); TFA1 (0.999); TFG1 (0.998); RPO21 (0.998); TFA2 (0.993); SSL2 (0.987); TFB5 (0.983); TFB3 (0.977); TFG2 (0.967); RPO26 (0.965); RAD3 (0.961); RPB5 (0.959); RPB4 (0.958); RPB10 (0.957); RPB9 (0.955); RPB2 (0.954); GCN5 (0.95); RPB3 (0.949)
Homologues (species, bitscore): GTF2A1 (Homo sapiens, 73.6); Gtf2a1 (Mus musculus, 73.9); gtf2a1 (Danio rerio, 75.9); gtf2a1 (Xenopus tropicalis, 62.8); TfIIA-L (Drosophila melanogaster, 71.6); pqn-51 (Caenorhabditis elegans, 63.9); AT1G07480 (Arabidopsis thaliana, 65.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:702468-703328:- | gene-YOR194C_AKU4011 | rna-NM_001183613.1_AKU4011 | cds-NP_014837.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:104508-105368:- | gene-YOR194C_BG1 | rna-NM_001183613.1_BG1 | cds-NP_014837.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:687299-688159:- | gene-YOR194C_Bruggeman | rna-NM_001183613.1_Bruggeman | cds-NP_014837.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:688582-689442:- | gene-YOR194C_CAT1 | rna-NM_001183613.1_CAT1 | cds-NP_014837.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:685455-686315:- | gene-YOR194C_CBS1585 | rna-NM_001183613.1_CBS1585 | cds-NP_014837.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:684145-685005:- | gene-YOR194C_CBS436 | rna-NM_001183613.1_CBS436 | cds-NP_014837.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:682573-683433:- | gene-YOR194C_CBS6412 | rna-NM_001183613.1_CBS6412 | cds-NP_014837.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:691212-692072:- | gene-YOR194C_CBS6413 | rna-NM_001183613.1_CBS6413 | cds-NP_014837.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:711438-712298:- | gene-YOR194C_CENPK1137D | rna-NM_001183613.1_CENPK1137D | cds-NP_014837.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:678598-679458:- | gene-YOR194C_EthanolRed | rna-NM_001183613.1_EthanolRed | cds-NP_014837.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:683995-684855:- | gene-YOR194C_FaliES1 | rna-NM_001183613.1_FaliES1 | cds-NP_014837.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:141892-142752:+ | gene-YOR194C_JAY291 | rna-NM_001183613.1_JAY291 | cds-NP_014837.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:691265-692125:- | gene-YOR194C_MUCL30387 | rna-NM_001183613.1_MUCL30387 | cds-NP_014837.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:698683-699543:- | gene-YOR194C_MUCL30388 | rna-NM_001183613.1_MUCL30388 | cds-NP_014837.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:692784-693644:- | gene-YOR194C_MUCL39482 | rna-NM_001183613.1_MUCL39482 | cds-NP_014837.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:702368-703228:- | gene-YOR194C_MUCL42920 | rna-NM_001183613.1_MUCL42920 | cds-NP_014837.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:711572-712432:- | gene-YOR194C_NCIM3186 | rna-NM_001183613.1_NCIM3186 | cds-NP_014837.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:692882-693742:- | gene-YOR194C_NCYC1407 | rna-NM_001183613.1_NCYC1407 | cds-NP_014837.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:692281-693141:- | gene-YOR194C_PE2H3 | rna-NM_001183613.1_PE2H3 | cds-NP_014837.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:702658-703518:- | gene-YOR194C_PE2H4 | rna-NM_001183613.1_PE2H4 | cds-NP_014837.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:711683-712543:- | gene-YOR194C_S288C | rna-NM_001183613.1_S288C | cds-NP_014837.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:121688-122548:- | gene-YOR194C_SA1 | rna-NM_001183613.1_SA1 | cds-NP_014837.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:683180-684040:- | gene-YOR194C_ThermosaccDry | rna-NM_001183613.1_ThermosaccDry | cds-NP_014837.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:746721-747581:- | gene-YOR194C_VR1 | rna-NM_001183613.1_VR1 | cds-NP_014837.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:416096-416956:- | gene-YOR194C_ZTW1 | rna-NM_001183613.1_ZTW1 | cds-NP_014837.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:689088-689948:- | gene-YOR194C_Sparadoxus | rna-NM_001183613.1_Sparadoxus | cds-NP_014837.1_Sparadoxus | 91.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |