Gene name: TMN2
Reference locus (S288C): YDR107C
Gene biotype: protein_coding
Description: Transmembrane 9 superfamily member 2; Protein with a role in cellular adhesion and filamentous growth; similar to Tmn3p; member of the evolutionarily conserved Transmembrane Nine family of proteins with nine membrane-spanning segments; TMN2 has a paralog, EMP70, that arose from the whole genome duplication
Top 10 interactors (score): GDT1 (0.794); MVP1 (0.768); HUA2 (0.766); IRC10 (0.736); BSP1 (0.657); UIP5 (0.616); YIL067C (0.616); KTR3 (0.6); COP1 (0.565); RAX2 (0.53); ERV25 (0.514); TMN3 (0.507); MOT3 (0.498); SNF7 (0.495); YOR292C (0.483); YKL077W (0.48); YNL115C (0.48); ULP2 (0.48); ANP1 (0.463); RER1 (0.462)
Homologues (species, bitscore): TM9SF4 (Homo sapiens, 400.2); Tm9sf4 (Mus musculus, 395.2); tm9sf2 (Danio rerio, 407.5); ENSXETP00000007529 (Xenopus tropicalis, 396.7); CG9318 (Drosophila melanogaster, 410.2); tag-123 (Caenorhabditis elegans, 397.1); TMN6 (Arabidopsis thaliana, 421.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:639945-641963:- | gene-YDR107C_AKU4011 | rna-NM_001180415.1_AKU4011 | cds-NP_010392.1_AKU4011 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:482908-484926:+ | gene-YDR107C_BG1 | rna-NM_001180415.1_BG1 | cds-NP_010392.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:672033-674051:- | gene-YDR107C_Bruggeman | rna-NM_001180415.1_Bruggeman | cds-NP_010392.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:658706-660724:- | gene-YDR107C_CAT1 | rna-NM_001180415.1_CAT1 | cds-NP_010392.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:630963-632981:- | gene-YDR107C_CBS1585 | rna-NM_001180415.1_CBS1585 | cds-NP_010392.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:656868-658886:- | gene-YDR107C_CBS436 | rna-NM_001180415.1_CBS436 | cds-NP_010392.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:627343-629361:- | gene-YDR107C_CBS6412 | rna-NM_001180415.1_CBS6412 | cds-NP_010392.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:656400-658418:- | gene-YDR107C_CBS6413 | rna-NM_001180415.1_CBS6413 | cds-NP_010392.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:661427-663445:- | gene-YDR107C_CENPK1137D | rna-NM_001180415.1_CENPK1137D | cds-NP_010392.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:641728-643746:- | gene-YDR107C_EthanolRed | rna-NM_001180415.1_EthanolRed | cds-NP_010392.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:648522-650540:- | gene-YDR107C_FaliES1 | rna-NM_001180415.1_FaliES1 | cds-NP_010392.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000002.1:619-2638:- | gene-YDR107C_JAY291 | rna-NM_001180415.1_JAY291 | cds-NP_010392.1_JAY291 | 99.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:657942-659960:- | gene-YDR107C_MUCL30387 | rna-NM_001180415.1_MUCL30387 | cds-NP_010392.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:646963-648981:- | gene-YDR107C_MUCL30388 | rna-NM_001180415.1_MUCL30388 | cds-NP_010392.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:632332-634350:- | gene-YDR107C_MUCL39482 | rna-NM_001180415.1_MUCL39482 | cds-NP_010392.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:570283-572301:- | gene-YDR107C_MUCL42920 | rna-NM_001180415.1_MUCL42920 | cds-NP_010392.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:668939-670957:- | gene-YDR107C_NCIM3186 | rna-NM_001180415.1_NCIM3186 | cds-NP_010392.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:631735-633753:- | gene-YDR107C_NCYC1407 | rna-NM_001180415.1_NCYC1407 | cds-NP_010392.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:651057-653075:- | gene-YDR107C_PE2H3 | rna-NM_001180415.1_PE2H3 | cds-NP_010392.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:650362-652380:- | gene-YDR107C_PE2H4 | rna-NM_001180415.1_PE2H4 | cds-NP_010392.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:669016-671034:- | gene-YDR107C_S288C | rna-NM_001180415.1_S288C | cds-NP_010392.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:17673-19691:- | gene-YDR107C_SA1 | rna-NM_001180415.1_SA1 | cds-NP_010392.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:648051-650069:- | gene-YDR107C_ThermosaccDry | rna-NM_001180415.1_ThermosaccDry | cds-NP_010392.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:661320-663338:- | gene-YDR107C_VR1 | rna-NM_001180415.1_VR1 | cds-NP_010392.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:645633-647651:- | gene-YDR107C_ZTW1 | rna-NM_001180415.1_ZTW1 | cds-NP_010392.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:650097-652115:- | gene-YDR107C_Sparadoxus | rna-NM_001180415.1_Sparadoxus | cds-NP_010392.1_Sparadoxus | 89.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |