Gene name: TMA7
Reference locus (S288C): YLR262C-A
Gene biotype: protein_coding
Description: Protein of unknown that associates with ribosomes; null mutant exhibits translation defects, altered polyribosome profiles, and resistance to the translation inhibitor anisomcyin; protein abundance increases in response to DNA replication stress; Belongs to the TMA7 family
Top 10 interactors (score): NOP10 (0.917); RPL29 (0.91); GIM5 (0.896); SMX2 (0.896); SPC1 (0.896); RPB10 (0.832); SDD2 (0.759); DAS1 (0.693); GIS2 (0.693); HUB1 (0.686); SEM1 (0.672); SME1 (0.663); RPS17A (0.654); RPS17B (0.643); RPL31B (0.633); RPL31A (0.619); LSM3 (0.601); COX8 (0.588); NOG2 (0.583); RPL39 (0.567)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:617733-617927:- | gene-YLR262C-A_AKU4011 | rna-NM_001184339.1_AKU4011 | cds-NP_013364.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:113966-114160:+ | gene-YLR262C-A_BG1 | rna-NM_001184339.1_BG1 | cds-NP_013364.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:651975-652169:- | gene-YLR262C-A_Bruggeman | rna-NM_001184339.1_Bruggeman | cds-NP_013364.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:651159-651353:- | gene-YLR262C-A_CAT1 | rna-NM_001184339.1_CAT1 | cds-NP_013364.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:653228-653422:- | gene-YLR262C-A_CBS1585 | rna-NM_001184339.1_CBS1585 | cds-NP_013364.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:637450-637644:- | gene-YLR262C-A_CBS436 | rna-NM_001184339.1_CBS436 | cds-NP_013364.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:616203-616397:- | gene-YLR262C-A_CBS6412 | rna-NM_001184339.1_CBS6412 | cds-NP_013364.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:653524-653718:- | gene-YLR262C-A_CBS6413 | rna-NM_001184339.1_CBS6413 | cds-NP_013364.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:654051-654245:- | gene-YLR262C-A_CENPK1137D | rna-NM_001184339.1_CENPK1137D | cds-NP_013364.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:611933-612127:- | gene-YLR262C-A_EthanolRed | rna-NM_001184339.1_EthanolRed | cds-NP_013364.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:640764-640958:- | gene-YLR262C-A_FaliES1 | rna-NM_001184339.1_FaliES1 | cds-NP_013364.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000136.1:18453-18647:+ | gene-YLR262C-A_JAY291 | rna-NM_001184339.1_JAY291 | cds-NP_013364.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:652835-653029:- | gene-YLR262C-A_MUCL30387 | rna-NM_001184339.1_MUCL30387 | cds-NP_013364.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:657600-657794:- | gene-YLR262C-A_MUCL30388 | rna-NM_001184339.1_MUCL30388 | cds-NP_013364.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:654209-654403:- | gene-YLR262C-A_MUCL39482 | rna-NM_001184339.1_MUCL39482 | cds-NP_013364.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:648979-649173:- | gene-YLR262C-A_MUCL42920 | rna-NM_001184339.1_MUCL42920 | cds-NP_013364.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:669442-669636:- | gene-YLR262C-A_NCIM3186 | rna-NM_001184339.1_NCIM3186 | cds-NP_013364.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:641196-641390:- | gene-YLR262C-A_NCYC1407 | rna-NM_001184339.1_NCYC1407 | cds-NP_013364.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:644965-645159:- | gene-YLR262C-A_PE2H3 | rna-NM_001184339.1_PE2H3 | cds-NP_013364.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:644709-644903:- | gene-YLR262C-A_PE2H4 | rna-NM_001184339.1_PE2H4 | cds-NP_013364.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:669468-669662:- | gene-YLR262C-A_S288C | rna-NM_001184339.1_S288C | cds-NP_013364.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:18698-18892:+ | gene-YLR262C-A_SA1 | rna-NM_001184339.1_SA1 | cds-NP_013364.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:642727-642921:- | gene-YLR262C-A_ThermosaccDry | rna-NM_001184339.1_ThermosaccDry | cds-NP_013364.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:654041-654235:- | gene-YLR262C-A_VR1 | rna-NM_001184339.1_VR1 | cds-NP_013364.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:167018-167212:- | gene-YLR262C-A_ZTW1 | rna-NM_001184339.1_ZTW1 | cds-NP_013364.1_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:628521-628715:- | gene-YLR262C-A_Sparadoxus | rna-NM_001184339.1_Sparadoxus | cds-NP_013364.1_Sparadoxus | 95.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |