Gene name: TMA46
Reference locus (S288C): YOR091W
Gene biotype: protein_coding
Description: Translation machinery-associated protein 46; Protein of unknown function that associates with translating ribosomes; interacts with GTPase Rbg1p
Top 10 interactors (score): RBG1 (0.999); GIR2 (0.984); RBG2 (0.978); RPA135 (0.934); MAP2 (0.923); FUN12 (0.843); TAE1 (0.831); GCN1 (0.816); SLH1 (0.802); ENP1 (0.767); SUP45 (0.767); BMS1 (0.766); TSR1 (0.743); EBP2 (0.737); SUI3 (0.726); TMA108 (0.706); RRB1 (0.705); GCN20 (0.698); BRX1 (0.683); ZUO1 (0.679)
Homologues (species, bitscore): ZC3H15 (Homo sapiens, 231.1); Zc3h15 (Mus musculus, 231.1); zc3h15 (Danio rerio, 224.6); zc3h15 (Xenopus tropicalis, 225.7); CG8635 (Drosophila melanogaster, 218.0); F27D4.4 (Caenorhabditis elegans, 223.4); AT2G20280 (Arabidopsis thaliana, 232.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:477784-478821:+ | gene-YOR091W_AKU4011 | rna-NM_001183510.1_AKU4011 | cds-NP_014734.2_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:100510-101547:- | gene-YOR091W_BG1 | rna-NM_001183510.1_BG1 | cds-NP_014734.2_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:481093-482130:+ | gene-YOR091W_Bruggeman | rna-NM_001183510.1_Bruggeman | cds-NP_014734.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:481068-482105:+ | gene-YOR091W_CAT1 | rna-NM_001183510.1_CAT1 | cds-NP_014734.2_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:473076-474113:+ | gene-YOR091W_CBS1585 | rna-NM_001183510.1_CBS1585 | cds-NP_014734.2_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:477828-478865:+ | gene-YOR091W_CBS436 | rna-NM_001183510.1_CBS436 | cds-NP_014734.2_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:471817-472854:+ | gene-YOR091W_CBS6412 | rna-NM_001183510.1_CBS6412 | cds-NP_014734.2_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:479112-480149:+ | gene-YOR091W_CBS6413 | rna-NM_001183510.1_CBS6413 | cds-NP_014734.2_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:493478-494515:+ | gene-YOR091W_CENPK1137D | rna-NM_001183510.1_CENPK1137D | cds-NP_014734.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:474315-475352:+ | gene-YOR091W_EthanolRed | rna-NM_001183510.1_EthanolRed | cds-NP_014734.2_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:477824-478861:+ | gene-YOR091W_FaliES1 | rna-NM_001183510.1_FaliES1 | cds-NP_014734.2_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000063.1:80657-81694:- | gene-YOR091W_JAY291 | rna-NM_001183510.1_JAY291 | cds-NP_014734.2_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:485629-486666:+ | gene-YOR091W_MUCL30387 | rna-NM_001183510.1_MUCL30387 | cds-NP_014734.2_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:490383-491420:+ | gene-YOR091W_MUCL30388 | rna-NM_001183510.1_MUCL30388 | cds-NP_014734.2_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:480712-481749:+ | gene-YOR091W_MUCL39482 | rna-NM_001183510.1_MUCL39482 | cds-NP_014734.2_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:496535-497572:+ | gene-YOR091W_MUCL42920 | rna-NM_001183510.1_MUCL42920 | cds-NP_014734.2_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:493322-494359:+ | gene-YOR091W_NCIM3186 | rna-NM_001183510.1_NCIM3186 | cds-NP_014734.2_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:486893-487930:+ | gene-YOR091W_NCYC1407 | rna-NM_001183510.1_NCYC1407 | cds-NP_014734.2_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:485901-486938:+ | gene-YOR091W_PE2H3 | rna-NM_001183510.1_PE2H3 | cds-NP_014734.2_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:496277-497314:+ | gene-YOR091W_PE2H4 | rna-NM_001183510.1_PE2H4 | cds-NP_014734.2_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:493433-494470:+ | gene-YOR091W_S288C | rna-NM_001183510.1_S288C | cds-NP_014734.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000098.1:28340-29377:- | gene-YOR091W_SA1 | rna-NM_001183510.1_SA1 | cds-NP_014734.2_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:476978-478015:+ | gene-YOR091W_ThermosaccDry | rna-NM_001183510.1_ThermosaccDry | cds-NP_014734.2_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:478821-479858:+ | gene-YOR091W_VR1 | rna-NM_001183510.1_VR1 | cds-NP_014734.2_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:210972-212009:+ | gene-YOR091W_ZTW1 | rna-NM_001183510.1_ZTW1 | cds-NP_014734.2_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:482765-483802:+ | gene-YOR091W_Sparadoxus | rna-NM_001183510.1_Sparadoxus | cds-NP_014734.2_Sparadoxus | 91.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |