TLC1 (YNCB0010W)

Gene profile

Gene name: TLC1
Reference locus (S288C): YNCB0010W
Gene biotype: telomerase_RNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:290021-291320:+ gene-YNCB0010W_AKU4011 rna-NR_132153.1_AKU4011 Unknown 98.5 99.9 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:280160-281460:+ gene-YNCB0010W_BG1 rna-NR_132153.1_BG1 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:290748-292047:+ gene-YNCB0010W_Bruggeman rna-NR_132153.1_Bruggeman Unknown 98.7 99.9 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:294438-295738:+ gene-YNCB0010W_CAT1 rna-NR_132153.1_CAT1 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:282317-283617:+ gene-YNCB0010W_CBS1585 rna-NR_132153.1_CBS1585 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005344.1:290322-291622:+ gene-YNCB0010W_CBS436 rna-NR_132153.1_CBS436 Unknown 99.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:380200-381501:+ gene-YNCB0010W_CBS6412 rna-NR_132153.1_CBS6412 Unknown 98.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:287433-288733:+ gene-YNCB0010W_CBS6413 rna-NR_132153.1_CBS6413 Unknown 98.5 99.9 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:301355-302653:+ gene-YNCB0010W_CENPK1137D rna-NR_132153.1_CENPK1137D Unknown 99.8 99.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:416798-418098:+ gene-YNCB0010W_EthanolRed rna-NR_132153.1_EthanolRed Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:305648-306948:+ gene-YNCB0010W_FaliES1 rna-NR_132153.1_FaliES1 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000441.1:24775-26077:- gene-YNCB0010W_JAY291 rna-NR_132153.1_JAY291 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:292350-293649:+ gene-YNCB0010W_MUCL30387 rna-NR_132153.1_MUCL30387 Unknown 98.6 99.9 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:292153-293453:+ gene-YNCB0010W_MUCL30388 rna-NR_132153.1_MUCL30388 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:282305-283605:+ gene-YNCB0010W_MUCL39482 rna-NR_132153.1_MUCL39482 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:289499-290799:+ gene-YNCB0010W_MUCL42920 rna-NR_132153.1_MUCL42920 Unknown 98.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:307384-308684:+ gene-YNCB0010W_NCIM3186 rna-NR_132153.1_NCIM3186 Unknown 95.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:283218-284517:+ gene-YNCB0010W_NCYC1407 rna-NR_132153.1_NCYC1407 Unknown 98.5 99.9 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:295386-296687:+ gene-YNCB0010W_PE2H3 rna-NR_132153.1_PE2H3 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:293062-294363:+ gene-YNCB0010W_PE2H4 rna-NR_132153.1_PE2H4 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:307587-308887:+ gene-YNCB0010W_S288C rna-NR_132153.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000017.1:168657-169960:- gene-YNCB0010W_SA1 rna-NR_132153.1_SA1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:305088-306389:+ gene-YNCB0010W_ThermosaccDry rna-NR_132153.1_ThermosaccDry Unknown 98.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:286739-288040:+ gene-YNCB0010W_VR1 rna-NR_132153.1_VR1 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:280814-282113:+ gene-YNCB0010W_ZTW1 rna-NR_132153.1_ZTW1 Unknown 98.6 99.9 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:317049-318307:+ gene-YNCB0010W_Sparadoxus rna-NR_132153.1_Sparadoxus Unknown 73.7 92.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files