Gene name: TIP41
Reference locus (S288C): YPR040W
Gene biotype: protein_coding
Description: Type 2A phosphatase activator TIP41; Protein that interacts with Tap42p, which regulates PP2A; component of the TOR (target of rapamycin) signaling pathway; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): TAP42 (0.999); PPH21 (0.998); PPH22 (0.997); SIT4 (0.976); PPH3 (0.975); SAP155 (0.968); SAP185 (0.945); PPG1 (0.941); TPD3 (0.925); RRD1 (0.925); RRD2 (0.912); PPM1 (0.901); PSY2 (0.895); SAP190 (0.891); SAP4 (0.874); YNL217W (0.863); MON1 (0.785); KOG1 (0.779); CDC55 (0.773); GLN3 (0.758)
Homologues (species, bitscore): TIPRL (Homo sapiens, 154.8); Tiprl (Mus musculus, 156.8); tiprl (Danio rerio, 167.5); tiprl (Xenopus tropicalis, 151.0); CG9578 (Drosophila melanogaster, 111.7); ZK688.9 (Caenorhabditis elegans, 113.2); AT4G34270 (Arabidopsis thaliana, 134.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:618991-620061:+ | gene-YPR040W_AKU4011 | rna-NM_001184137.1_AKU4011 | cds-NP_015365.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:277629-278699:- | gene-YPR040W_BG1 | rna-NM_001184137.1_BG1 | cds-NP_015365.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:696626-697696:+ | gene-YPR040W_Bruggeman | rna-NM_001184137.1_Bruggeman | cds-NP_015365.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:739595-740665:+ | gene-YPR040W_CAT1 | rna-NM_001184137.1_CAT1 | cds-NP_015365.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:622675-623745:+ | gene-YPR040W_CBS1585 | rna-NM_001184137.1_CBS1585 | cds-NP_015365.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:637036-638106:+ | gene-YPR040W_CBS436 | rna-NM_001184137.1_CBS436 | cds-NP_015365.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:626423-627493:+ | gene-YPR040W_CBS6412 | rna-NM_001184137.1_CBS6412 | cds-NP_015365.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:619624-620694:+ | gene-YPR040W_CBS6413 | rna-NM_001184137.1_CBS6413 | cds-NP_015365.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:647282-648352:+ | gene-YPR040W_CENPK1137D | rna-NM_001184137.1_CENPK1137D | cds-NP_015365.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:616911-617981:+ | gene-YPR040W_EthanolRed | rna-NM_001184137.1_EthanolRed | cds-NP_015365.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:624714-625784:+ | gene-YPR040W_FaliES1 | rna-NM_001184137.1_FaliES1 | cds-NP_015365.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000116.1:2127-3197:- | gene-YPR040W_JAY291 | rna-NM_001184137.1_JAY291 | cds-NP_015365.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:637838-638908:+ | gene-YPR040W_MUCL30387 | rna-NM_001184137.1_MUCL30387 | cds-NP_015365.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:636533-637603:+ | gene-YPR040W_MUCL30388 | rna-NM_001184137.1_MUCL30388 | cds-NP_015365.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:615932-617002:+ | gene-YPR040W_MUCL39482 | rna-NM_001184137.1_MUCL39482 | cds-NP_015365.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:678729-679799:+ | gene-YPR040W_MUCL42920 | rna-NM_001184137.1_MUCL42920 | cds-NP_015365.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:647288-648358:+ | gene-YPR040W_NCIM3186 | rna-NM_001184137.1_NCIM3186 | cds-NP_015365.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:623863-624933:+ | gene-YPR040W_NCYC1407 | rna-NM_001184137.1_NCYC1407 | cds-NP_015365.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:630067-631137:+ | gene-YPR040W_PE2H3 | rna-NM_001184137.1_PE2H3 | cds-NP_015365.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:629715-630785:+ | gene-YPR040W_PE2H4 | rna-NM_001184137.1_PE2H4 | cds-NP_015365.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:647305-648375:+ | gene-YPR040W_S288C | rna-NM_001184137.1_S288C | cds-NP_015365.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:52397-53467:- | gene-YPR040W_SA1 | rna-NM_001184137.1_SA1 | cds-NP_015365.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:624514-625584:+ | gene-YPR040W_ThermosaccDry | rna-NM_001184137.1_ThermosaccDry | cds-NP_015365.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:640731-641801:+ | gene-YPR040W_VR1 | rna-NM_001184137.1_VR1 | cds-NP_015365.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:623831-624901:+ | gene-YPR040W_ZTW1 | rna-NM_001184137.1_ZTW1 | cds-NP_015365.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:624632-625702:+ | gene-YPR040W_Sparadoxus | rna-NM_001184137.1_Sparadoxus | cds-NP_015365.1_Sparadoxus | 91.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |