Gene name: TIP1
Reference locus (S288C): YBR067C
Gene biotype: protein_coding
Description: Temperature shock-inducible protein 1; Major cell wall mannoprotein with possible lipase activity; transcription is induced by heat- and cold-shock; member of the Srp1p/Tip1p family of serine-alanine-rich proteins
Top 10 interactors (score): PNS1 (0.811); MTC6 (0.77); LSM8 (0.7); DAL4 (0.658); MAE1 (0.617); UGA4 (0.611); FLO5 (0.573); NOP2 (0.572); MDE1 (0.56); ESA1 (0.526); LAA1 (0.525); YNL058C (0.485)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:354521-355135:- | gene-YBR067C_AKU4011 | rna-NM_001178415.1_AKU4011 | cds-NP_009623.1_AKU4011 | 96.9 | 97.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:344778-345407:- | gene-YBR067C_BG1 | rna-NM_001178415.1_BG1 | cds-NP_009623.1_BG1 | 93.5 | 96.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:355509-356123:- | gene-YBR067C_Bruggeman | rna-NM_001178415.1_Bruggeman | cds-NP_009623.1_Bruggeman | 96.6 | 97.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:359024-359653:- | gene-YBR067C_CAT1 | rna-NM_001178415.1_CAT1 | cds-NP_009623.1_CAT1 | 93.5 | 96.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:346802-347416:- | gene-YBR067C_CBS1585 | rna-NM_001178415.1_CBS1585 | cds-NP_009623.1_CBS1585 | 96.9 | 97.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:354878-355492:- | gene-YBR067C_CBS436 | rna-NM_001178415.1_CBS436 | cds-NP_009623.1_CBS436 | 96.5 | 97.1 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:445020-445652:- | gene-YBR067C_CBS6412 | rna-NM_001178415.1_CBS6412 | cds-NP_009623.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:351926-352558:- | gene-YBR067C_CBS6413 | rna-NM_001178415.1_CBS6413 | cds-NP_009623.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:365863-366495:- | gene-YBR067C_CENPK1137D | rna-NM_001178415.1_CENPK1137D | cds-NP_009623.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:481289-481921:- | gene-YBR067C_EthanolRed | rna-NM_001178415.1_EthanolRed | cds-NP_009623.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:370567-371199:- | gene-YBR067C_FaliES1 | rna-NM_001178415.1_FaliES1 | cds-NP_009623.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000124.1:18504-19133:- | gene-YBR067C_JAY291 | rna-NM_001178415.1_JAY291 | cds-NP_009623.1_JAY291 | 93.5 | 96.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:356875-357489:- | gene-YBR067C_MUCL30387 | rna-NM_001178415.1_MUCL30387 | cds-NP_009623.1_MUCL30387 | 96.6 | 97.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:356891-357541:- | gene-YBR067C_MUCL30388 | rna-NM_001178415.1_MUCL30388 | cds-NP_009623.1_MUCL30388 | 97.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:346790-347404:- | gene-YBR067C_MUCL39482 | rna-NM_001178415.1_MUCL39482 | cds-NP_009623.1_MUCL39482 | 96.9 | 97.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:354010-354624:- | gene-YBR067C_MUCL42920 | rna-NM_001178415.1_MUCL42920 | cds-NP_009623.1_MUCL42920 | 96.6 | 97.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:371900-372532:- | gene-YBR067C_NCIM3186 | rna-NM_001178415.1_NCIM3186 | cds-NP_009623.1_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:347708-348340:- | gene-YBR067C_NCYC1407 | rna-NM_001178415.1_NCYC1407 | cds-NP_009623.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:359953-360582:- | gene-YBR067C_PE2H3 | rna-NM_001178415.1_PE2H3 | cds-NP_009623.1_PE2H3 | 93.5 | 96.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:357629-358258:- | gene-YBR067C_PE2H4 | rna-NM_001178415.1_PE2H4 | cds-NP_009623.1_PE2H4 | 93.5 | 96.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:372103-372735:- | gene-YBR067C_S288C | rna-NM_001178415.1_S288C | cds-NP_009623.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:104766-105395:+ | gene-YBR067C_SA1 | rna-NM_001178415.1_SA1 | cds-NP_009623.1_SA1 | 96.6 | 99.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:369578-370210:- | gene-YBR067C_ThermosaccDry | rna-NM_001178415.1_ThermosaccDry | cds-NP_009623.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:351571-352200:- | gene-YBR067C_VR1 | rna-NM_001178415.1_VR1 | cds-NP_009623.1_VR1 | 93.5 | 96.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:345265-345879:- | gene-YBR067C_ZTW1 | rna-NM_001178415.1_ZTW1 | cds-NP_009623.1_ZTW1 | 96.6 | 97.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:382358-382978:- | gene-YBR067C_Sparadoxus | rna-NM_001178415.1_Sparadoxus | cds-NP_009623.1_Sparadoxus | 88.8 | 97.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |