Gene name: TIM23
Reference locus (S288C): YNR017W
Gene biotype: protein_coding
Description: Essential component of the TIM23 complex; involved in protein import into mitochondrial matrix and inner membrane; with Tim17p, contributes to architecture and function of the import channel; TIM23 complex is short for the translocase of the inner mitochondrial membrane
Top 10 interactors (score): TIM21 (0.999); TIM22 (0.999); TIM44 (0.999); TIM17 (0.999); TIM50 (0.999); PAM16 (0.999); TIM13 (0.998); TIM8 (0.998); PAM18 (0.998); TOM22 (0.998); SSC1 (0.995); TOM40 (0.994); TIM12 (0.992); MGR2 (0.985); TIM9 (0.984); PAM17 (0.982); TIM18 (0.982); TIM54 (0.979); TIM10 (0.979); TOM20 (0.978)
Homologues (species, bitscore): TIMM23 (Homo sapiens, 61.2); Timm23 (Mus musculus, 57.8); timm23 (Danio rerio, 60.8); timm23 (Xenopus tropicalis, 57.8); CG40042 (Drosophila melanogaster, 61.6); TIM23-1 (Arabidopsis thaliana, 66.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:646522-647190:+ | gene-YNR017W_AKU4011 | rna-NM_001183194.3_AKU4011 | cds-NP_014414.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:554443-555111:+ | gene-YNR017W_BG1 | rna-NM_001183194.3_BG1 | cds-NP_014414.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:664027-664695:+ | gene-YNR017W_Bruggeman | rna-NM_001183194.3_Bruggeman | cds-NP_014414.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:698216-698884:+ | gene-YNR017W_CAT1 | rna-NM_001183194.3_CAT1 | cds-NP_014414.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:652319-652987:+ | gene-YNR017W_CBS1585 | rna-NM_001183194.3_CBS1585 | cds-NP_014414.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:713985-714653:+ | gene-YNR017W_CBS436 | rna-NM_001183194.3_CBS436 | cds-NP_014414.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:641513-642181:+ | gene-YNR017W_CBS6412 | rna-NM_001183194.3_CBS6412 | cds-NP_014414.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:643212-643880:+ | gene-YNR017W_CBS6413 | rna-NM_001183194.3_CBS6413 | cds-NP_014414.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:656599-657267:+ | gene-YNR017W_CENPK1137D | rna-NM_001183194.3_CENPK1137D | cds-NP_014414.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:648261-648929:+ | gene-YNR017W_EthanolRed | rna-NM_001183194.3_EthanolRed | cds-NP_014414.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:639461-640129:+ | gene-YNR017W_FaliES1 | rna-NM_001183194.3_FaliES1 | cds-NP_014414.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:62653-63321:- | gene-YNR017W_JAY291 | rna-NM_001183194.3_JAY291 | cds-NP_014414.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:661773-662441:+ | gene-YNR017W_MUCL30387 | rna-NM_001183194.3_MUCL30387 | cds-NP_014414.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:702581-703249:+ | gene-YNR017W_MUCL30388 | rna-NM_001183194.3_MUCL30388 | cds-NP_014414.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:643822-644490:+ | gene-YNR017W_MUCL39482 | rna-NM_001183194.3_MUCL39482 | cds-NP_014414.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:647984-648652:+ | gene-YNR017W_MUCL42920 | rna-NM_001183194.3_MUCL42920 | cds-NP_014414.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:662882-663550:+ | gene-YNR017W_NCIM3186 | rna-NM_001183194.3_NCIM3186 | cds-NP_014414.3_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:646328-646996:+ | gene-YNR017W_NCYC1407 | rna-NM_001183194.3_NCYC1407 | cds-NP_014414.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:647396-648064:+ | gene-YNR017W_PE2H3 | rna-NM_001183194.3_PE2H3 | cds-NP_014414.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:648714-649382:+ | gene-YNR017W_PE2H4 | rna-NM_001183194.3_PE2H4 | cds-NP_014414.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:662913-663581:+ | gene-YNR017W_S288C | rna-NM_001183194.3_S288C | cds-NP_014414.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000068.1:60621-61289:+ | gene-YNR017W_SA1 | rna-NM_001183194.3_SA1 | cds-NP_014414.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:639803-640471:+ | gene-YNR017W_ThermosaccDry | rna-NM_001183194.3_ThermosaccDry | cds-NP_014414.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:681738-682406:+ | gene-YNR017W_VR1 | rna-NM_001183194.3_VR1 | cds-NP_014414.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:549205-549873:+ | gene-YNR017W_ZTW1 | rna-NM_001183194.3_ZTW1 | cds-NP_014414.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:653875-654543:+ | gene-YNR017W_Sparadoxus | rna-NM_001183194.3_Sparadoxus | cds-NP_014414.3_Sparadoxus | 91.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |