Gene name: TIM17
Reference locus (S288C): YJL143W
Gene biotype: protein_coding
Description: Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex; with Tim23p, contributes to the architecture and function of the import channel; may link the import motor to the core Translocase of the Inner Mitochondrial membrane (TIM23 complex); Belongs to the Tim17/Tim22/Tim23 family
Top 10 interactors (score): TOM40 (0.999); SSC1 (0.999); TIM50 (0.999); PAM16 (0.999); TIM44 (0.999); TIM23 (0.999); PAM18 (0.999); TIM21 (0.999); MGE1 (0.998); PAM17 (0.998); TIM10 (0.995); MGR2 (0.99); TIM9 (0.989); TIM8 (0.989); MAS2 (0.989); TOM22 (0.984); MAS1 (0.982); TIM54 (0.97); TOM20 (0.97); TIM13 (0.968)
Homologues (species, bitscore): TIMM17A (Homo sapiens, 145.6); Timm17b (Mus musculus, 145.2); timm17a (Danio rerio, 143.3); timm17a (Xenopus tropicalis, 139.0); Tim17b (Drosophila melanogaster, 152.1); E04A4.5 (Caenorhabditis elegans, 129.0); TIM17-1 (Arabidopsis thaliana, 141.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:135395-135871:+ | gene-YJL143W_AKU4011 | rna-NM_001181576.1_AKU4011 | cds-NP_012392.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:477848-478324:- | gene-YJL143W_BG1 | rna-NM_001181576.1_BG1 | cds-NP_012392.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:147231-147707:+ | gene-YJL143W_Bruggeman | rna-NM_001181576.1_Bruggeman | cds-NP_012392.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:151019-151495:+ | gene-YJL143W_CAT1 | rna-NM_001181576.1_CAT1 | cds-NP_012392.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:141029-141505:+ | gene-YJL143W_CBS1585 | rna-NM_001181576.1_CBS1585 | cds-NP_012392.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:165781-166257:+ | gene-YJL143W_CBS436 | rna-NM_001181576.1_CBS436 | cds-NP_012392.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:137438-137914:+ | gene-YJL143W_CBS6412 | rna-NM_001181576.1_CBS6412 | cds-NP_012392.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:138502-138978:+ | gene-YJL143W_CBS6413 | rna-NM_001181576.1_CBS6413 | cds-NP_012392.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:129490-129966:+ | gene-YJL143W_CENPK1137D | rna-NM_001181576.1_CENPK1137D | cds-NP_012392.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:139553-140029:+ | gene-YJL143W_EthanolRed | rna-NM_001181576.1_EthanolRed | cds-NP_012392.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:145031-145507:+ | gene-YJL143W_FaliES1 | rna-NM_001181576.1_FaliES1 | cds-NP_012392.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000099.1:26212-26688:+ | gene-YJL143W_JAY291 | rna-NM_001181576.1_JAY291 | cds-NP_012392.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:149500-149976:+ | gene-YJL143W_MUCL30387 | rna-NM_001181576.1_MUCL30387 | cds-NP_012392.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:145552-146028:+ | gene-YJL143W_MUCL30388 | rna-NM_001181576.1_MUCL30388 | cds-NP_012392.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:139771-140247:+ | gene-YJL143W_MUCL39482 | rna-NM_001181576.1_MUCL39482 | cds-NP_012392.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:145291-145767:+ | gene-YJL143W_MUCL42920 | rna-NM_001181576.1_MUCL42920 | cds-NP_012392.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:147080-147556:+ | gene-YJL143W_NCIM3186 | rna-NM_001181576.1_NCIM3186 | cds-NP_012392.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:138380-138856:+ | gene-YJL143W_NCYC1407 | rna-NM_001181576.1_NCYC1407 | cds-NP_012392.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:151189-151665:+ | gene-YJL143W_PE2H3 | rna-NM_001181576.1_PE2H3 | cds-NP_012392.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:150832-151308:+ | gene-YJL143W_PE2H4 | rna-NM_001181576.1_PE2H4 | cds-NP_012392.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:147101-147577:+ | gene-YJL143W_S288C | rna-NM_001181576.1_S288C | cds-NP_012392.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:6037-6513:- | gene-YJL143W_SA1 | rna-NM_001181576.1_SA1 | cds-NP_012392.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:138222-138698:+ | gene-YJL143W_ThermosaccDry | rna-NM_001181576.1_ThermosaccDry | cds-NP_012392.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:145306-145782:+ | gene-YJL143W_VR1 | rna-NM_001181576.1_VR1 | cds-NP_012392.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:125511-125987:+ | gene-YJL143W_ZTW1 | rna-NM_001181576.1_ZTW1 | cds-NP_012392.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:150803-151279:+ | gene-YJL143W_Sparadoxus | rna-NM_001181576.1_Sparadoxus | cds-NP_012392.1_Sparadoxus | 92.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |