Gene name: TIM13
Reference locus (S288C): YGR181W
Gene biotype: protein_coding
Description: Mitochondrial import inner membrane translocase subunit TIM13; Mitochondrial intermembrane space protein; forms a complex with Tim8p that delivers a subset of hydrophobic proteins to the TIM22 complex for insertion into the inner membrane
Top 10 interactors (score): TIM12 (0.999); TIM8 (0.999); TIM9 (0.999); TIM10 (0.999); MIA40 (0.999); TIM23 (0.998); TOM40 (0.997); TOM22 (0.994); ERV1 (0.993); TIM50 (0.992); COX17 (0.991); COX19 (0.987); TIM17 (0.968); MDM35 (0.961); PAM16 (0.961); MIX17 (0.959); TIM22 (0.95); TIM44 (0.938); MIX14 (0.936); MDM10 (0.932)
Homologues (species, bitscore): TIMM13 (Homo sapiens, 70.9); Timm13 (Mus musculus, 69.7); timm13 (Danio rerio, 68.9); timm13 (Xenopus tropicalis, 67.4); Tim13 (Drosophila melanogaster, 70.9); tin-13 (Caenorhabditis elegans, 59.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:826038-826355:+ | gene-YGR181W_AKU4011 | rna-NM_001181310.3_AKU4011 | cds-NP_011697.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:104149-104466:+ | gene-YGR181W_BG1 | rna-NM_001181310.3_BG1 | cds-NP_011697.3_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:831966-832283:+ | gene-YGR181W_Bruggeman | rna-NM_001181310.3_Bruggeman | cds-NP_011697.3_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:828064-828381:+ | gene-YGR181W_CAT1 | rna-NM_001181310.3_CAT1 | cds-NP_011697.3_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:826754-827071:+ | gene-YGR181W_CBS1585 | rna-NM_001181310.3_CBS1585 | cds-NP_011697.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:830646-830963:+ | gene-YGR181W_CBS436 | rna-NM_001181310.3_CBS436 | cds-NP_011697.3_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:818124-818441:+ | gene-YGR181W_CBS6412 | rna-NM_001181310.3_CBS6412 | cds-NP_011697.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:823620-823937:+ | gene-YGR181W_CBS6413 | rna-NM_001181310.3_CBS6413 | cds-NP_011697.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:858012-858329:+ | gene-YGR181W_CENPK1137D | rna-NM_001181310.3_CENPK1137D | cds-NP_011697.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:812630-812947:+ | gene-YGR181W_EthanolRed | rna-NM_001181310.3_EthanolRed | cds-NP_011697.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:817021-817338:+ | gene-YGR181W_FaliES1 | rna-NM_001181310.3_FaliES1 | cds-NP_011697.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000364.1:17447-17764:- | gene-YGR181W_JAY291 | rna-NM_001181310.3_JAY291 | cds-NP_011697.3_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:829456-829773:+ | gene-YGR181W_MUCL30387 | rna-NM_001181310.3_MUCL30387 | cds-NP_011697.3_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:829167-829484:+ | gene-YGR181W_MUCL30388 | rna-NM_001181310.3_MUCL30388 | cds-NP_011697.3_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:822330-822647:+ | gene-YGR181W_MUCL39482 | rna-NM_001181310.3_MUCL39482 | cds-NP_011697.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:838945-839262:+ | gene-YGR181W_MUCL42920 | rna-NM_001181310.3_MUCL42920 | cds-NP_011697.3_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:858287-858604:+ | gene-YGR181W_NCIM3186 | rna-NM_001181310.3_NCIM3186 | cds-NP_011697.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:817439-817756:+ | gene-YGR181W_NCYC1407 | rna-NM_001181310.3_NCYC1407 | cds-NP_011697.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:836633-836950:+ | gene-YGR181W_PE2H3 | rna-NM_001181310.3_PE2H3 | cds-NP_011697.3_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:841743-842060:+ | gene-YGR181W_PE2H4 | rna-NM_001181310.3_PE2H4 | cds-NP_011697.3_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:858287-858604:+ | gene-YGR181W_S288C | rna-NM_001181310.3_S288C | cds-NP_011697.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000035.1:82004-82321:+ | gene-YGR181W_SA1 | rna-NM_001181310.3_SA1 | cds-NP_011697.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:837532-837849:+ | gene-YGR181W_ThermosaccDry | rna-NM_001181310.3_ThermosaccDry | cds-NP_011697.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:941778-942095:+ | gene-YGR181W_VR1 | rna-NM_001181310.3_VR1 | cds-NP_011697.3_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:138969-139286:+ | gene-YGR181W_ZTW1 | rna-NM_001181310.3_ZTW1 | cds-NP_011697.3_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:829166-829483:+ | gene-YGR181W_Sparadoxus | rna-NM_001181310.3_Sparadoxus | cds-NP_011697.3_Sparadoxus | 91.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |