Gene name: TIF35
Reference locus (S288C): YDR429C
Gene biotype: protein_coding
Description: eIF3g subunit of the eukaryotic translation initiation factor 3 (eIF3); subunit of the core complex of eIF3; is essential for translation; stimulates resumption of ribosomal scanning during translation reinitiation; eIF3 is also involved in programmed stop codon readthrough
Top 10 interactors (score): RPS0A (0.999); SUI3 (0.999); SUI1 (0.999); RPS20 (0.999); SUI2 (0.999); RPG1 (0.999); TIF34 (0.999); NIP1 (0.999); GCD11 (0.999); RPS3 (0.999); RPS2 (0.999); TIF5 (0.999); HCR1 (0.999); PRT1 (0.999); RPS5 (0.997); ASC1 (0.997); TIF3 (0.997); RPS6B (0.997); RPS15 (0.996); RPS4A (0.996)
Homologues (species, bitscore): EIF3G (Homo sapiens, 141.7); Eif3g (Mus musculus, 144.4); eif3g (Danio rerio, 137.9); eif3s4 (Xenopus tropicalis, 137.9); CG10881 (Drosophila melanogaster, 125.2); eif-3.G (Caenorhabditis elegans, 123.2); EIF3G1 (Arabidopsis thaliana, 122.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1264745-1265569:- | gene-YDR429C_AKU4011 | rna-NM_001180737.1_AKU4011 | cds-NP_010717.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:143084-143908:- | gene-YDR429C_BG1 | rna-NM_001180737.1_BG1 | cds-NP_010717.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1295132-1295956:- | gene-YDR429C_Bruggeman | rna-NM_001180737.1_Bruggeman | cds-NP_010717.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1273326-1274150:- | gene-YDR429C_CAT1 | rna-NM_001180737.1_CAT1 | cds-NP_010717.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1259074-1259898:- | gene-YDR429C_CBS1585 | rna-NM_001180737.1_CBS1585 | cds-NP_010717.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1278406-1279230:- | gene-YDR429C_CBS436 | rna-NM_001180737.1_CBS436 | cds-NP_010717.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1255040-1255864:- | gene-YDR429C_CBS6412 | rna-NM_001180737.1_CBS6412 | cds-NP_010717.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1277189-1278013:- | gene-YDR429C_CBS6413 | rna-NM_001180737.1_CBS6413 | cds-NP_010717.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1323155-1323979:- | gene-YDR429C_CENPK1137D | rna-NM_001180737.1_CENPK1137D | cds-NP_010717.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1268322-1269146:- | gene-YDR429C_EthanolRed | rna-NM_001180737.1_EthanolRed | cds-NP_010717.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1271629-1272453:- | gene-YDR429C_FaliES1 | rna-NM_001180737.1_FaliES1 | cds-NP_010717.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000263.1:15908-16732:- | gene-YDR429C_JAY291 | rna-NM_001180737.1_JAY291 | cds-NP_010717.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1278774-1279598:- | gene-YDR429C_MUCL30387 | rna-NM_001180737.1_MUCL30387 | cds-NP_010717.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1260710-1261534:- | gene-YDR429C_MUCL30388 | rna-NM_001180737.1_MUCL30388 | cds-NP_010717.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1250566-1251390:- | gene-YDR429C_MUCL39482 | rna-NM_001180737.1_MUCL39482 | cds-NP_010717.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1192966-1193790:- | gene-YDR429C_MUCL42920 | rna-NM_001180737.1_MUCL42920 | cds-NP_010717.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1324400-1325224:- | gene-YDR429C_NCIM3186 | rna-NM_001180737.1_NCIM3186 | cds-NP_010717.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1264330-1265154:- | gene-YDR429C_NCYC1407 | rna-NM_001180737.1_NCYC1407 | cds-NP_010717.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1275151-1275975:- | gene-YDR429C_PE2H3 | rna-NM_001180737.1_PE2H3 | cds-NP_010717.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1280719-1281543:- | gene-YDR429C_PE2H4 | rna-NM_001180737.1_PE2H4 | cds-NP_010717.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1324477-1325301:- | gene-YDR429C_S288C | rna-NM_001180737.1_S288C | cds-NP_010717.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000082.1:31916-32740:+ | gene-YDR429C_SA1 | rna-NM_001180737.1_SA1 | cds-NP_010717.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1275891-1276715:- | gene-YDR429C_ThermosaccDry | rna-NM_001180737.1_ThermosaccDry | cds-NP_010717.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1291113-1291937:- | gene-YDR429C_VR1 | rna-NM_001180737.1_VR1 | cds-NP_010717.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:318533-319357:- | gene-YDR429C_ZTW1 | rna-NM_001180737.1_ZTW1 | cds-NP_010717.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1272285-1273109:- | gene-YDR429C_Sparadoxus | rna-NM_001180737.1_Sparadoxus | cds-NP_010717.1_Sparadoxus | 94.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |