Gene name: TIF34
Reference locus (S288C): YMR146C
Gene biotype: protein_coding
Description: eIF3i subunit of the eukaryotic translation initiation factor 3 (eIF3); subunit of the core complex of eIF3; essential for translation; stimulates rate of ribosomal scanning during translation reinitiation; eIF3 is also involved in programmed stop codon readthrough
Top 10 interactors (score): TIF5 (0.999); RPS20 (0.999); TIF35 (0.999); SUI1 (0.999); SUI3 (0.999); PRT1 (0.999); HCR1 (0.999); NIP1 (0.999); RPS2 (0.999); GCD11 (0.999); RPG1 (0.999); SUI2 (0.999); RPS13 (0.998); RPS3 (0.998); RPS0A (0.998); ASC1 (0.998); RPS5 (0.998); RPS12 (0.998); RLI1 (0.998); RPS15 (0.997)
Homologues (species, bitscore): EIF3I (Homo sapiens, 301.2); Eif3i (Mus musculus, 301.6); eif3i (Danio rerio, 302.0); eif3i (Xenopus tropicalis, 305.1); Trip1 (Drosophila melanogaster, 300.8); eif-3.I (Caenorhabditis elegans, 269.6); TRIP-1 (Arabidopsis thaliana, 262.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:596974-598017:- | gene-YMR146C_AKU4011 | rna-NM_001182648.1_AKU4011 | cds-NP_013866.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:74511-75554:+ | gene-YMR146C_BG1 | rna-NM_001182648.1_BG1 | cds-NP_013866.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:540161-541204:- | gene-YMR146C_Bruggeman | rna-NM_001182648.1_Bruggeman | cds-NP_013866.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:542376-543419:- | gene-YMR146C_CAT1 | rna-NM_001182648.1_CAT1 | cds-NP_013866.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:529897-530940:- | gene-YMR146C_CBS1585 | rna-NM_001182648.1_CBS1585 | cds-NP_013866.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:533790-534833:- | gene-YMR146C_CBS436 | rna-NM_001182648.1_CBS436 | cds-NP_013866.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:642891-643934:- | gene-YMR146C_CBS6412 | rna-NM_001182648.1_CBS6412 | cds-NP_013866.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:528458-529501:- | gene-YMR146C_CBS6413 | rna-NM_001182648.1_CBS6413 | cds-NP_013866.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:552002-553045:- | gene-YMR146C_CENPK1137D | rna-NM_001182648.1_CENPK1137D | cds-NP_013866.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:528091-529134:- | gene-YMR146C_EthanolRed | rna-NM_001182648.1_EthanolRed | cds-NP_013866.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:535090-536133:- | gene-YMR146C_FaliES1 | rna-NM_001182648.1_FaliES1 | cds-NP_013866.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000115.1:6924-7967:- | gene-YMR146C_JAY291 | rna-NM_001182648.1_JAY291 | cds-NP_013866.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:534886-535929:- | gene-YMR146C_MUCL30387 | rna-NM_001182648.1_MUCL30387 | cds-NP_013866.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:540418-541461:- | gene-YMR146C_MUCL30388 | rna-NM_001182648.1_MUCL30388 | cds-NP_013866.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:530598-531641:- | gene-YMR146C_MUCL39482 | rna-NM_001182648.1_MUCL39482 | cds-NP_013866.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:536897-537940:- | gene-YMR146C_MUCL42920 | rna-NM_001182648.1_MUCL42920 | cds-NP_013866.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:557435-558478:- | gene-YMR146C_NCIM3186 | rna-NM_001182648.1_NCIM3186 | cds-NP_013866.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:530237-531280:- | gene-YMR146C_NCYC1407 | rna-NM_001182648.1_NCYC1407 | cds-NP_013866.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:540678-541721:- | gene-YMR146C_PE2H3 | rna-NM_001182648.1_PE2H3 | cds-NP_013866.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:541135-542178:- | gene-YMR146C_PE2H4 | rna-NM_001182648.1_PE2H4 | cds-NP_013866.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:557481-558524:- | gene-YMR146C_S288C | rna-NM_001182648.1_S288C | cds-NP_013866.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000048.1:12747-13790:+ | gene-YMR146C_SA1 | rna-NM_001182648.1_SA1 | cds-NP_013866.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:530738-531781:- | gene-YMR146C_ThermosaccDry | rna-NM_001182648.1_ThermosaccDry | cds-NP_013866.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:543192-544235:- | gene-YMR146C_VR1 | rna-NM_001182648.1_VR1 | cds-NP_013866.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:505634-506677:- | gene-YMR146C_ZTW1 | rna-NM_001182648.1_ZTW1 | cds-NP_013866.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:542029-543072:- | gene-YMR146C_Sparadoxus | rna-NM_001182648.1_Sparadoxus | cds-NP_013866.1_Sparadoxus | 94.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |