Gene name: THS1
Reference locus (S288C): YIL078W
Gene biotype: protein_coding
Description: Threonine--tRNA ligase, cytoplasmic; Threonyl-tRNA synthetase; essential cytoplasmic protein; human homolog TARS can complement yeast null mutant
Top 10 interactors (score): ILS1 (0.998); KRS1 (0.994); VAS1 (0.988); TYS1 (0.988); GRS1 (0.987); CDC60 (0.986); MES1 (0.984); SES1 (0.983); DED81 (0.979); HTS1 (0.978); WRS1 (0.972); GUS1 (0.968); YHR020W (0.965); GRS2 (0.962); ALA1 (0.936); DPS1 (0.929); FRS2 (0.929); MSW1 (0.924); GLN4 (0.923); AIM10 (0.901)
Homologues (species, bitscore): TARSL2 (Homo sapiens, 798.1); Tars (Mus musculus, 811.2); tars (Danio rerio, 816.6); tars (Xenopus tropicalis, 810.4); Aats-thr (Drosophila melanogaster, 814.3); tars-1 (Caenorhabditis elegans, 793.5); AT5G26830 (Arabidopsis thaliana, 756.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:209167-211371:+ | gene-YIL078W_AKU4011 | rna-NM_001179428.3_AKU4011 | cds-NP_116578.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:71101-73305:+ | gene-YIL078W_BG1 | rna-NM_001179428.3_BG1 | cds-NP_116578.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:214583-216787:+ | gene-YIL078W_Bruggeman | rna-NM_001179428.3_Bruggeman | cds-NP_116578.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:204865-207069:+ | gene-YIL078W_CAT1 | rna-NM_001179428.3_CAT1 | cds-NP_116578.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:208738-210942:+ | gene-YIL078W_CBS1585 | rna-NM_001179428.3_CBS1585 | cds-NP_116578.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:204792-206996:+ | gene-YIL078W_CBS436 | rna-NM_001179428.3_CBS436 | cds-NP_116578.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:206115-208319:+ | gene-YIL078W_CBS6412 | rna-NM_001179428.3_CBS6412 | cds-NP_116578.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:200658-202862:+ | gene-YIL078W_CBS6413 | rna-NM_001179428.3_CBS6413 | cds-NP_116578.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:204205-206409:+ | gene-YIL078W_CENPK1137D | rna-NM_001179428.3_CENPK1137D | cds-NP_116578.3_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:193462-195666:+ | gene-YIL078W_EthanolRed | rna-NM_001179428.3_EthanolRed | cds-NP_116578.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:210370-212574:+ | gene-YIL078W_FaliES1 | rna-NM_001179428.3_FaliES1 | cds-NP_116578.3_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000025.1:16932-19136:- | gene-YIL078W_JAY291 | rna-NM_001179428.3_JAY291 | cds-NP_116578.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:212799-215003:+ | gene-YIL078W_MUCL30387 | rna-NM_001179428.3_MUCL30387 | cds-NP_116578.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:209408-211612:+ | gene-YIL078W_MUCL30388 | rna-NM_001179428.3_MUCL30388 | cds-NP_116578.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:209585-211789:+ | gene-YIL078W_MUCL39482 | rna-NM_001179428.3_MUCL39482 | cds-NP_116578.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:212946-215150:+ | gene-YIL078W_MUCL42920 | rna-NM_001179428.3_MUCL42920 | cds-NP_116578.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:212499-214703:+ | gene-YIL078W_NCIM3186 | rna-NM_001179428.3_NCIM3186 | cds-NP_116578.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:213862-216066:+ | gene-YIL078W_NCYC1407 | rna-NM_001179428.3_NCYC1407 | cds-NP_116578.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:207847-210051:+ | gene-YIL078W_PE2H3 | rna-NM_001179428.3_PE2H3 | cds-NP_116578.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:202563-204767:+ | gene-YIL078W_PE2H4 | rna-NM_001179428.3_PE2H4 | cds-NP_116578.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:212499-214703:+ | gene-YIL078W_S288C | rna-NM_001179428.3_S288C | cds-NP_116578.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:111129-113333:- | gene-YIL078W_SA1 | rna-NM_001179428.3_SA1 | cds-NP_116578.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:209033-211237:+ | gene-YIL078W_ThermosaccDry | rna-NM_001179428.3_ThermosaccDry | cds-NP_116578.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:206721-208925:+ | gene-YIL078W_VR1 | rna-NM_001179428.3_VR1 | cds-NP_116578.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:183297-185501:+ | gene-YIL078W_ZTW1 | rna-NM_001179428.3_ZTW1 | cds-NP_116578.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:207349-209553:+ | gene-YIL078W_Sparadoxus | rna-NM_001179428.3_Sparadoxus | cds-NP_116578.3_Sparadoxus | 93.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |