Gene name: THR4
Reference locus (S288C): YCR053W
Gene biotype: protein_coding
Description: Threonine synthase; conserved protein that catalyzes formation of threonine from O-phosphohomoserine; expression is regulated by the GCN4-mediated general amino acid control pathway
Top 10 interactors (score): THR1 (0.999); HOM3 (0.997); HOM6 (0.997); HOM2 (0.997); PRO3 (0.995); TYR1 (0.994); SER2 (0.991); TRP5 (0.99); SSU72 (0.976); SER1 (0.974); ILV1 (0.974); CHA1 (0.973); GLY1 (0.95); RTT103 (0.918); FCP1 (0.918); RPO21 (0.907); ESS1 (0.896); PCF11 (0.886); SPT5 (0.874); KIN28 (0.868)
Homologues (species, bitscore): THNSL2 (Homo sapiens, 308.5); Thnsl2 (Mus musculus, 313.9); thnsl2 (Danio rerio, 276.9); thnsl2 (Xenopus tropicalis, 305.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:211155-212699:+ | gene-YCR053W_AKU4011 | rna-NM_001178767.1_AKU4011 | cds-NP_009982.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:65358-66902:+ | gene-YCR053W_BG1 | rna-NM_001178767.1_BG1 | cds-NP_009982.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:207115-208659:+ | gene-YCR053W_Bruggeman | rna-NM_001178767.1_Bruggeman | cds-NP_009982.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:218488-220032:+ | gene-YCR053W_CAT1 | rna-NM_001178767.1_CAT1 | cds-NP_009982.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:205933-207477:+ | gene-YCR053W_CBS1585 | rna-NM_001178767.1_CBS1585 | cds-NP_009982.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:217829-219373:+ | gene-YCR053W_CBS436 | rna-NM_001178767.1_CBS436 | cds-NP_009982.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:197673-199217:+ | gene-YCR053W_CBS6412 | rna-NM_001178767.1_CBS6412 | cds-NP_009982.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:212050-213594:+ | gene-YCR053W_CBS6413 | rna-NM_001178767.1_CBS6413 | cds-NP_009982.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:215879-217423:+ | gene-YCR053W_CENPK1137D | rna-NM_001178767.1_CENPK1137D | cds-NP_009982.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:207118-208662:+ | gene-YCR053W_EthanolRed | rna-NM_001178767.1_EthanolRed | cds-NP_009982.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:212283-213827:+ | gene-YCR053W_FaliES1 | rna-NM_001178767.1_FaliES1 | cds-NP_009982.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000014.1:9353-10897:- | gene-YCR053W_JAY291 | rna-NM_001178767.1_JAY291 | cds-NP_009982.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:204099-205643:+ | gene-YCR053W_MUCL30387 | rna-NM_001178767.1_MUCL30387 | cds-NP_009982.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:203473-205017:+ | gene-YCR053W_MUCL30388 | rna-NM_001178767.1_MUCL30388 | cds-NP_009982.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:212506-214050:+ | gene-YCR053W_MUCL39482 | rna-NM_001178767.1_MUCL39482 | cds-NP_009982.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:208948-210492:+ | gene-YCR053W_MUCL42920 | rna-NM_001178767.1_MUCL42920 | cds-NP_009982.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:216329-217873:+ | gene-YCR053W_NCIM3186 | rna-NM_001178767.1_NCIM3186 | cds-NP_009982.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:213365-214909:+ | gene-YCR053W_NCYC1407 | rna-NM_001178767.1_NCYC1407 | cds-NP_009982.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:222043-223587:+ | gene-YCR053W_PE2H3 | rna-NM_001178767.1_PE2H3 | cds-NP_009982.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:216569-218113:+ | gene-YCR053W_PE2H4 | rna-NM_001178767.1_PE2H4 | cds-NP_009982.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:216697-218241:+ | gene-YCR053W_S288C | rna-NM_001178767.1_S288C | cds-NP_009982.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000044.1:16580-18124:+ | gene-YCR053W_SA1 | rna-NM_001178767.1_SA1 | cds-NP_009982.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:212266-213810:+ | gene-YCR053W_ThermosaccDry | rna-NM_001178767.1_ThermosaccDry | cds-NP_009982.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:223541-225085:+ | gene-YCR053W_VR1 | rna-NM_001178767.1_VR1 | cds-NP_009982.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:210089-211633:+ | gene-YCR053W_ZTW1 | rna-NM_001178767.1_ZTW1 | cds-NP_009982.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:244248-245792:+ | gene-YCR053W_Sparadoxus | rna-NM_001178767.1_Sparadoxus | cds-NP_009982.1_Sparadoxus | 92.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |