Gene name: THR1
Reference locus (S288C): YHR025W
Gene biotype: protein_coding
Description: Homoserine kinase; conserved protein required for threonine biosynthesis; long-lived protein that is preferentially retained in mother cells and forms cytoplasmic filaments; expression is regulated by the GCN4-mediated general amino acid control pathway
Top 10 interactors (score): THR4 (0.999); HOM6 (0.999); HOM3 (0.999); HOM2 (0.997); STR2 (0.951); MET6 (0.925); CHA1 (0.923); SAM4 (0.92); DED81 (0.909); CYS3 (0.901); YML082W (0.898); BAT1 (0.895); CYS4 (0.891); BAT2 (0.885); STR3 (0.871); MHT1 (0.863); IRC7 (0.858); YLL058W (0.858); TRP5 (0.855); ILV1 (0.841)
Homologues (species, bitscore): HSK (Arabidopsis thaliana, 88.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:147636-148709:+ | gene-YHR025W_AKU4011 | rna-NM_001179155.1_AKU4011 | cds-NP_011890.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:67922-68995:+ | gene-YHR025W_BG1 | rna-NM_001179155.1_BG1 | cds-NP_011890.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:155160-156233:+ | gene-YHR025W_Bruggeman | rna-NM_001179155.1_Bruggeman | cds-NP_011890.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:149541-150614:+ | gene-YHR025W_CAT1 | rna-NM_001179155.1_CAT1 | cds-NP_011890.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:147968-149041:+ | gene-YHR025W_CBS1585 | rna-NM_001179155.1_CBS1585 | cds-NP_011890.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:142313-143386:+ | gene-YHR025W_CBS436 | rna-NM_001179155.1_CBS436 | cds-NP_011890.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:147660-148733:+ | gene-YHR025W_CBS6412 | rna-NM_001179155.1_CBS6412 | cds-NP_011890.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:147792-148865:+ | gene-YHR025W_CBS6413 | rna-NM_001179155.1_CBS6413 | cds-NP_011890.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:152707-153780:+ | gene-YHR025W_CENPK1137D | rna-NM_001179155.1_CENPK1137D | cds-NP_011890.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:147181-148254:+ | gene-YHR025W_EthanolRed | rna-NM_001179155.1_EthanolRed | cds-NP_011890.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:148160-149233:+ | gene-YHR025W_FaliES1 | rna-NM_001179155.1_FaliES1 | cds-NP_011890.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000273.1:32374-33447:- | gene-YHR025W_JAY291 | rna-NM_001179155.1_JAY291 | cds-NP_011890.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:154229-155302:+ | gene-YHR025W_MUCL30387 | rna-NM_001179155.1_MUCL30387 | cds-NP_011890.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:154701-155774:+ | gene-YHR025W_MUCL30388 | rna-NM_001179155.1_MUCL30388 | cds-NP_011890.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:146995-148068:+ | gene-YHR025W_MUCL39482 | rna-NM_001179155.1_MUCL39482 | cds-NP_011890.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:153772-154845:+ | gene-YHR025W_MUCL42920 | rna-NM_001179155.1_MUCL42920 | cds-NP_011890.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:159320-160393:+ | gene-YHR025W_NCIM3186 | rna-NM_001179155.1_NCIM3186 | cds-NP_011890.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:146907-147980:+ | gene-YHR025W_NCYC1407 | rna-NM_001179155.1_NCYC1407 | cds-NP_011890.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:149318-150391:+ | gene-YHR025W_PE2H3 | rna-NM_001179155.1_PE2H3 | cds-NP_011890.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:156759-157832:+ | gene-YHR025W_PE2H4 | rna-NM_001179155.1_PE2H4 | cds-NP_011890.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:159438-160511:+ | gene-YHR025W_S288C | rna-NM_001179155.1_S288C | cds-NP_011890.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000106.1:12983-14056:+ | gene-YHR025W_SA1 | rna-NM_001179155.1_SA1 | cds-NP_011890.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:149249-150322:+ | gene-YHR025W_ThermosaccDry | rna-NM_001179155.1_ThermosaccDry | cds-NP_011890.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:155789-156862:+ | gene-YHR025W_VR1 | rna-NM_001179155.1_VR1 | cds-NP_011890.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:140840-141913:+ | gene-YHR025W_ZTW1 | rna-NM_001179155.1_ZTW1 | cds-NP_011890.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:146966-148039:+ | gene-YHR025W_Sparadoxus | rna-NM_001179155.1_Sparadoxus | cds-NP_011890.1_Sparadoxus | 92.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |