THI73 (YLR004C)


Gene profile

Gene name: THI73
Reference locus (S288C): YLR004C
Gene biotype: protein_coding

Description: Thiamine pathway transporter THI73; Putative plasma membrane permease; proposed to be involved in carboxylic acid uptake and repressed by thiamine; substrate of Dbf2p/Mob1p kinase; transcription is altered if mitochondrial dysfunction occurs

Top 10 interactors (score): THI80 (0.753); THI6 (0.75); THI4 (0.722); YJR124C (0.715); YNL144C (0.705); AIM41 (0.698); YJR015W (0.697); YLR046C (0.693); ICY1 (0.678); PRM4 (0.675); NNR1 (0.674); YKL162C (0.671); SET2 (0.67); YJL193W (0.658); QRI7 (0.657); NPP1 (0.626); YNL208W (0.618); THI72 (0.575); THI21 (0.567); THI13 (0.567)

Homologues (species, bitscore): MFS16 (Drosophila melanogaster, 52.4); G3Pp1 (Arabidopsis thaliana, 50.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:145913-147484:- gene-YLR004C_AKU4011 rna-NM_001181891.1_AKU4011 cds-NP_013104.1_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000212.1:109123-110694:- gene-YLR004C_BG1 rna-NM_001181891.1_BG1 cds-NP_013104.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:156285-157856:- gene-YLR004C_Bruggeman rna-NM_001181891.1_Bruggeman cds-NP_013104.1_Bruggeman 99.9 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:156604-158175:- gene-YLR004C_CAT1 rna-NM_001181891.1_CAT1 cds-NP_013104.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:153512-155083:- gene-YLR004C_CBS1585 rna-NM_001181891.1_CBS1585 cds-NP_013104.1_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:144137-145708:- gene-YLR004C_CBS436 rna-NM_001181891.1_CBS436 cds-NP_013104.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:152284-153855:- gene-YLR004C_CBS6412 rna-NM_001181891.1_CBS6412 cds-NP_013104.1_CBS6412 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:153778-155349:- gene-YLR004C_CBS6413 rna-NM_001181891.1_CBS6413 cds-NP_013104.1_CBS6413 99.8 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:143197-144768:- gene-YLR004C_CENPK1137D rna-NM_001181891.1_CENPK1137D cds-NP_013104.1_CENPK1137D 99.8 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:145934-147505:- gene-YLR004C_EthanolRed rna-NM_001181891.1_EthanolRed cds-NP_013104.1_EthanolRed 99.8 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:145505-147076:- gene-YLR004C_FaliES1 rna-NM_001181891.1_FaliES1 cds-NP_013104.1_FaliES1 99.6 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000083.1:8519-10090:+ gene-YLR004C_JAY291 rna-NM_001181891.1_JAY291 cds-NP_013104.1_JAY291 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:153641-155212:- gene-YLR004C_MUCL30387 rna-NM_001181891.1_MUCL30387 cds-NP_013104.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:159338-160909:- gene-YLR004C_MUCL30388 rna-NM_001181891.1_MUCL30388 cds-NP_013104.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:153983-155554:- gene-YLR004C_MUCL39482 rna-NM_001181891.1_MUCL39482 cds-NP_013104.1_MUCL39482 99.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:153911-155482:- gene-YLR004C_MUCL42920 rna-NM_001181891.1_MUCL42920 cds-NP_013104.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:157908-159479:- gene-YLR004C_NCIM3186 rna-NM_001181891.1_NCIM3186 cds-NP_013104.1_NCIM3186 99.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:145586-147157:- gene-YLR004C_NCYC1407 rna-NM_001181891.1_NCYC1407 cds-NP_013104.1_NCYC1407 99.8 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:151934-153505:- gene-YLR004C_PE2H3 rna-NM_001181891.1_PE2H3 cds-NP_013104.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:151675-153246:- gene-YLR004C_PE2H4 rna-NM_001181891.1_PE2H4 cds-NP_013104.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:157934-159505:- gene-YLR004C_S288C rna-NM_001181891.1_S288C cds-NP_013104.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000062.1:61132-62703:- gene-YLR004C_SA1 rna-NM_001181891.1_SA1 cds-NP_013104.1_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:146008-147579:- gene-YLR004C_ThermosaccDry rna-NM_001181891.1_ThermosaccDry cds-NP_013104.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:159386-160957:- gene-YLR004C_VR1 rna-NM_001181891.1_VR1 cds-NP_013104.1_VR1 99.9 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000023.1:145342-146913:- gene-YLR004C_ZTW1 rna-NM_001181891.1_ZTW1 cds-NP_013104.1_ZTW1 99.8 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:153963-155534:- gene-YLR004C_Sparadoxus rna-NM_001181891.1_Sparadoxus cds-NP_013104.1_Sparadoxus 93.9 100.0 Verified 1 1 0 False False True False False

Additional files