Gene name: THI20
Reference locus (S288C): YOL055C
Gene biotype: protein_coding
Description: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI20; Trifunctional enzyme of thiamine biosynthesis, degradation and salvage; has hydroxymethylpyrimidine (HMP) kinase, HMP-phosphate (HMP-P) kinase and thiaminase activities; member of a gene family with THI21 and THI22; HMP and HMP-P kinase activity redundant with Thi21p; In the C-terminal section; belongs to the thiaminase-2 family
Top 10 interactors (score): THI6 (0.999); THI80 (0.992); THI5 (0.988); THI13 (0.987); THI11 (0.987); THI12 (0.982); THI4 (0.981); THI21 (0.927); PHO8 (0.911); PHO3 (0.872); THI7 (0.859); PET18 (0.858); PDC2 (0.808); THI2 (0.782); SNO2 (0.763); THI3 (0.712); DIA3 (0.65); PHO5 (0.65); PHO11 (0.65); LTP1 (0.65)
Homologues (species, bitscore): TH1 (Arabidopsis thaliana, 164.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:208115-209770:- | gene-YOL055C_AKU4011 | rna-NM_001183310.1_AKU4011 | cds-NP_014586.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:23967-25622:- | gene-YOL055C_BG1 | rna-NM_001183310.1_BG1 | cds-NP_014586.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:209769-211424:- | gene-YOL055C_Bruggeman | rna-NM_001183310.1_Bruggeman | cds-NP_014586.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:209285-210940:- | gene-YOL055C_CAT1 | rna-NM_001183310.1_CAT1 | cds-NP_014586.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:202500-204155:- | gene-YOL055C_CBS1585 | rna-NM_001183310.1_CBS1585 | cds-NP_014586.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:207651-209306:- | gene-YOL055C_CBS436 | rna-NM_001183310.1_CBS436 | cds-NP_014586.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:202435-204090:- | gene-YOL055C_CBS6412 | rna-NM_001183310.1_CBS6412 | cds-NP_014586.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:209383-211038:- | gene-YOL055C_CBS6413 | rna-NM_001183310.1_CBS6413 | cds-NP_014586.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:224123-225778:- | gene-YOL055C_CENPK1137D | rna-NM_001183310.1_CENPK1137D | cds-NP_014586.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:205210-206865:- | gene-YOL055C_EthanolRed | rna-NM_001183310.1_EthanolRed | cds-NP_014586.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:207754-209409:- | gene-YOL055C_FaliES1 | rna-NM_001183310.1_FaliES1 | cds-NP_014586.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000018.1:56160-57815:+ | gene-YOL055C_JAY291 | rna-NM_001183310.1_JAY291 | cds-NP_014586.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:213541-215196:- | gene-YOL055C_MUCL30387 | rna-NM_001183310.1_MUCL30387 | cds-NP_014586.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:217833-219488:- | gene-YOL055C_MUCL30388 | rna-NM_001183310.1_MUCL30388 | cds-NP_014586.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:210427-212082:- | gene-YOL055C_MUCL39482 | rna-NM_001183310.1_MUCL39482 | cds-NP_014586.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:225894-227549:- | gene-YOL055C_MUCL42920 | rna-NM_001183310.1_MUCL42920 | cds-NP_014586.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:224309-225964:- | gene-YOL055C_NCIM3186 | rna-NM_001183310.1_NCIM3186 | cds-NP_014586.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:217044-218699:- | gene-YOL055C_NCYC1407 | rna-NM_001183310.1_NCYC1407 | cds-NP_014586.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:200053-201708:- | gene-YOL055C_PE2H3 | rna-NM_001183310.1_PE2H3 | cds-NP_014586.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:211027-212682:- | gene-YOL055C_PE2H4 | rna-NM_001183310.1_PE2H4 | cds-NP_014586.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:224420-226075:- | gene-YOL055C_S288C | rna-NM_001183310.1_S288C | cds-NP_014586.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:192407-194062:- | gene-YOL055C_SA1 | rna-NM_001183310.1_SA1 | cds-NP_014586.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:206762-208417:- | gene-YOL055C_ThermosaccDry | rna-NM_001183310.1_ThermosaccDry | cds-NP_014586.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:207483-209138:- | gene-YOL055C_VR1 | rna-NM_001183310.1_VR1 | cds-NP_014586.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:206405-208060:- | gene-YOL055C_ZTW1 | rna-NM_001183310.1_ZTW1 | cds-NP_014586.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:209896-211551:- | gene-YOL055C_Sparadoxus | rna-NM_001183310.1_Sparadoxus | cds-NP_014586.1_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |