Gene name: THI12
Reference locus (S288C): YNL332W
Gene biotype: protein_coding
Description: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase THI12; Protein involved in synthesis of the thiamine precursor HMP; member of a subtelomeric gene family including THI5, THI11, THI12, and THI13; hydroxymethylpyrimidine is also known as HMP; Belongs to the NMT1/THI5 family
Top 10 interactors (score): THI21 (0.988); THI20 (0.982); THI4 (0.967); THI6 (0.93); YPR172W (0.9); BUD16 (0.9); YLR456W (0.9); PDX3 (0.9); THI5 (0.874); THI11 (0.874); THI13 (0.87); THI80 (0.867); BUD17 (0.8); YGR017W (0.8); THI22 (0.778); THI74 (0.771); THI7 (0.746); SNO3 (0.724); NMT1 (0.722); TPN1 (0.716)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:15457-16478:+ | gene-YNL332W_CBS436 | rna-NM_001183170.1_CBS436 | cds-NP_014067.1_CBS436 | 66.3 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | MBVP01000092.1:1-654:- | gene-YNL332W_CBS6413 | rna-NM_001183170.1_CBS6413 | cds-NP_014067.1_CBS6413 | 62.9 | 63.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | MBWB01000054.1:1-863:- | gene-YNL332W_EthanolRed | rna-NM_001183170.1_EthanolRed | cds-NP_014067.1_EthanolRed | 83.0 | 84.3 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:6446-7467:+ | gene-YNL332W_FaliES1 | rna-NM_001183170.1_FaliES1 | cds-NP_014067.1_FaliES1 | 62.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000034.1:863-1101:- | gene-YNL332W_JAY291 | rna-NM_001183170.1_JAY291 | cds-NP_014067.1_JAY291 | 23.1 | 23.3 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:5078-6100:+ | gene-YNL332W_PE2H3 | rna-NM_001183170.1_PE2H3 | cds-NP_014067.1_PE2H3 | 96.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:4466-5488:+ | gene-YNL332W_PE2H4 | rna-NM_001183170.1_PE2H4 | cds-NP_014067.1_PE2H4 | 96.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:14832-15854:+ | gene-YNL332W_S288C | rna-NM_001183170.1_S288C | cds-NP_014067.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:7053-8075:+ | gene-YNL332W_ThermosaccDry | rna-NM_001183170.1_ThermosaccDry | cds-NP_014067.1_ThermosaccDry | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:19945-20966:+ | gene-YNL332W_VR1 | rna-NM_001183170.1_VR1 | cds-NP_014067.1_VR1 | 54.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:18310-19332:+ | gene-YNL332W_Sparadoxus | rna-NM_001183170.1_Sparadoxus | cds-NP_014067.1_Sparadoxus | 93.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |