Gene name: THI11
Reference locus (S288C): YJR156C
Gene biotype: protein_coding
Description: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate synthase THI11; Protein involved in synthesis of the thiamine precursor HMP; member of a subtelomeric gene family including THI5, THI11, THI12, and THI13; hydroxymethylpyrimidine is also known as HMP
Top 10 interactors (score): THI20 (0.987); THI21 (0.984); THI4 (0.969); THI6 (0.918); YPR172W (0.9); BUD16 (0.9); YLR456W (0.9); PDX3 (0.9); THI12 (0.874); THI5 (0.86); THI7 (0.842); THI22 (0.823); THI13 (0.819); YLR379W (0.81); THI80 (0.8); YGR017W (0.8); BUD17 (0.8); SNO1 (0.77); SNZ2 (0.726); THI74 (0.713)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000105.1:5891-7001:+ | gene-YJR156C_BG1 | rna-NM_001181814.3_BG1 | cds-NP_012690.3_BG1 | 91.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005508.1:7435-8457:+ | gene-YJR156C_Bruggeman | rna-NM_001181814.3_Bruggeman | cds-NP_012690.3_Bruggeman | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:17738-18760:+ | gene-YJR156C_CAT1 | rna-NM_001181814.3_CAT1 | cds-NP_012690.3_CAT1 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:731742-732764:- | gene-YJR156C_CBS436 | rna-NM_001181814.3_CBS436 | cds-NP_012690.3_CBS436 | 91.6 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:13005-13934:+ | gene-YJR156C_EthanolRed | rna-NM_001181814.3_EthanolRed | cds-NP_012690.3_EthanolRed | 63.6 | 81.2 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:718636-718974:- | gene-YJR156C_FaliES1 | rna-NM_001181814.3_FaliES1 | cds-NP_012690.3_FaliES1 | 32.8 | 33.1 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000447.1:9549-10097:+ | gene-YJR156C_JAY291 | rna-NM_001181814.3_JAY291 | cds-NP_012690.3_JAY291 | 53.3 | 53.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000054.1:101-1123:- | gene-YJR156C_MUCL30387 | rna-NM_001181814.3_MUCL30387 | cds-NP_012690.3_MUCL30387 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:3905-4927:+ | gene-YJR156C_MUCL30388 | rna-NM_001181814.3_MUCL30388 | cds-NP_012690.3_MUCL30388 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:8032-9054:+ | gene-YJR156C_MUCL42920 | rna-NM_001181814.3_MUCL42920 | cds-NP_012690.3_MUCL42920 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:728553-729575:- | gene-YJR156C_NCIM3186 | rna-NM_001181814.3_NCIM3186 | cds-NP_012690.3_NCIM3186 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:721535-722557:- | gene-YJR156C_PE2H3 | rna-NM_001181814.3_PE2H3 | cds-NP_012690.3_PE2H3 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:715224-716246:- | gene-YJR156C_PE2H4 | rna-NM_001181814.3_PE2H4 | cds-NP_012690.3_PE2H4 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:728574-729596:- | gene-YJR156C_S288C | rna-NM_001181814.3_S288C | cds-NP_012690.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000108.1:1-296:+ | gene-YJR156C_SA1 | rna-NM_001181814.3_SA1 | cds-NP_012690.3_SA1 | 28.9 | 28.9 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | MBVZ01000043.1:6429-7306:+ | gene-YJR156C_VR1 | rna-NM_001181814.3_VR1 | cds-NP_012690.3_VR1 | 83.9 | 85.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:689133-690155:- | gene-YJR156C_ZTW1 | rna-NM_001181814.3_ZTW1 | cds-NP_012690.3_ZTW1 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:16567-17589:+ | gene-YJR156C_Sparadoxus | rna-NM_001181814.3_Sparadoxus | cds-NP_012690.3_Sparadoxus | 92.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |