Gene name: TFG1
Reference locus (S288C): YGR186W
Gene biotype: protein_coding
Description: TFIIF (Transcription Factor II) largest subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP74
Top 10 interactors (score): RPB9 (0.999); SUA7 (0.999); FCP1 (0.999); TAF14 (0.999); RPB2 (0.999); RPB4 (0.999); TFG2 (0.999); TFA1 (0.999); RPB3 (0.999); RPO21 (0.999); TFA2 (0.999); RPB5 (0.999); RAD3 (0.998); TOA1 (0.998); SPT15 (0.997); RPB7 (0.997); TOA2 (0.996); TAF1 (0.996); TAF2 (0.996); SSL2 (0.996)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:835527-837734:+ | gene-YGR186W_AKU4011 | rna-NM_001181315.1_AKU4011 | cds-NP_011702.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:113635-115842:+ | gene-YGR186W_BG1 | rna-NM_001181315.1_BG1 | cds-NP_011702.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:841455-843662:+ | gene-YGR186W_Bruggeman | rna-NM_001181315.1_Bruggeman | cds-NP_011702.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:837554-839761:+ | gene-YGR186W_CAT1 | rna-NM_001181315.1_CAT1 | cds-NP_011702.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:836243-838450:+ | gene-YGR186W_CBS1585 | rna-NM_001181315.1_CBS1585 | cds-NP_011702.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:840132-842339:+ | gene-YGR186W_CBS436 | rna-NM_001181315.1_CBS436 | cds-NP_011702.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:827613-829820:+ | gene-YGR186W_CBS6412 | rna-NM_001181315.1_CBS6412 | cds-NP_011702.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:833109-835316:+ | gene-YGR186W_CBS6413 | rna-NM_001181315.1_CBS6413 | cds-NP_011702.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:867499-869706:+ | gene-YGR186W_CENPK1137D | rna-NM_001181315.1_CENPK1137D | cds-NP_011702.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:822118-824325:+ | gene-YGR186W_EthanolRed | rna-NM_001181315.1_EthanolRed | cds-NP_011702.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:826509-828716:+ | gene-YGR186W_FaliES1 | rna-NM_001181315.1_FaliES1 | cds-NP_011702.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000364.1:6071-8278:- | gene-YGR186W_JAY291 | rna-NM_001181315.1_JAY291 | cds-NP_011702.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:838945-841152:+ | gene-YGR186W_MUCL30387 | rna-NM_001181315.1_MUCL30387 | cds-NP_011702.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:838656-840863:+ | gene-YGR186W_MUCL30388 | rna-NM_001181315.1_MUCL30388 | cds-NP_011702.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:831816-834023:+ | gene-YGR186W_MUCL39482 | rna-NM_001181315.1_MUCL39482 | cds-NP_011702.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:848435-850642:+ | gene-YGR186W_MUCL42920 | rna-NM_001181315.1_MUCL42920 | cds-NP_011702.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:867774-869981:+ | gene-YGR186W_NCIM3186 | rna-NM_001181315.1_NCIM3186 | cds-NP_011702.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:826926-829133:+ | gene-YGR186W_NCYC1407 | rna-NM_001181315.1_NCYC1407 | cds-NP_011702.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:846119-848326:+ | gene-YGR186W_PE2H3 | rna-NM_001181315.1_PE2H3 | cds-NP_011702.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:851229-853436:+ | gene-YGR186W_PE2H4 | rna-NM_001181315.1_PE2H4 | cds-NP_011702.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:867774-869981:+ | gene-YGR186W_S288C | rna-NM_001181315.1_S288C | cds-NP_011702.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000035.1:91490-93697:+ | gene-YGR186W_SA1 | rna-NM_001181315.1_SA1 | cds-NP_011702.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:847020-849227:+ | gene-YGR186W_ThermosaccDry | rna-NM_001181315.1_ThermosaccDry | cds-NP_011702.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:951264-953471:+ | gene-YGR186W_VR1 | rna-NM_001181315.1_VR1 | cds-NP_011702.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:148455-150662:+ | gene-YGR186W_ZTW1 | rna-NM_001181315.1_ZTW1 | cds-NP_011702.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:838637-840844:+ | gene-YGR186W_Sparadoxus | rna-NM_001181315.1_Sparadoxus | cds-NP_011702.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |