Gene name: TFC8
Reference locus (S288C): YPL007C
Gene biotype: protein_coding
Description: Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of TFIIIC TauB domain that binds BoxB promoter sites of tRNA and other genes; linker between TauB and TauA domains; human homolog is TFIIIC-90
Top 10 interactors (score): TFC6 (0.999); TFC1 (0.998); TFC3 (0.998); TFC7 (0.998); TFC4 (0.996); BDP1 (0.995); SPT15 (0.991); BRF1 (0.99); PZF1 (0.728); YGR109W-B (0.711); RPO31 (0.617); YTM1 (0.57); ERB1 (0.566); RRN7 (0.497); PRP45 (0.481); YML089C (0.48); RRN6 (0.468); RPC31 (0.464); RET1 (0.454); PRP39 (0.453)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:513538-515304:- | gene-YPL007C_AKU4011 | rna-NM_001183821.1_AKU4011 | cds-NP_015318.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:381869-383635:+ | gene-YPL007C_BG1 | rna-NM_001183821.1_BG1 | cds-NP_015318.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:590481-592247:- | gene-YPL007C_Bruggeman | rna-NM_001183821.1_Bruggeman | cds-NP_015318.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:633227-634993:- | gene-YPL007C_CAT1 | rna-NM_001183821.1_CAT1 | cds-NP_015318.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:517715-519481:- | gene-YPL007C_CBS1585 | rna-NM_001183821.1_CBS1585 | cds-NP_015318.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:531783-533549:- | gene-YPL007C_CBS436 | rna-NM_001183821.1_CBS436 | cds-NP_015318.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:521464-523230:- | gene-YPL007C_CBS6412 | rna-NM_001183821.1_CBS6412 | cds-NP_015318.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:514175-515941:- | gene-YPL007C_CBS6413 | rna-NM_001183821.1_CBS6413 | cds-NP_015318.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:542083-543849:- | gene-YPL007C_CENPK1137D | rna-NM_001183821.1_CENPK1137D | cds-NP_015318.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:511962-513728:- | gene-YPL007C_EthanolRed | rna-NM_001183821.1_EthanolRed | cds-NP_015318.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:519792-521558:- | gene-YPL007C_FaliES1 | rna-NM_001183821.1_FaliES1 | cds-NP_015318.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000341.1:16455-18221:+ | gene-YPL007C_JAY291 | rna-NM_001183821.1_JAY291 | cds-NP_015318.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:531434-533200:- | gene-YPL007C_MUCL30387 | rna-NM_001183821.1_MUCL30387 | cds-NP_015318.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:530538-532304:- | gene-YPL007C_MUCL30388 | rna-NM_001183821.1_MUCL30388 | cds-NP_015318.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:510955-512721:- | gene-YPL007C_MUCL39482 | rna-NM_001183821.1_MUCL39482 | cds-NP_015318.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:570052-571818:- | gene-YPL007C_MUCL42920 | rna-NM_001183821.1_MUCL42920 | cds-NP_015318.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:542065-543831:- | gene-YPL007C_NCIM3186 | rna-NM_001183821.1_NCIM3186 | cds-NP_015318.1_NCIM3186 | 95.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:518214-519980:- | gene-YPL007C_NCYC1407 | rna-NM_001183821.1_NCYC1407 | cds-NP_015318.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:524914-526680:- | gene-YPL007C_PE2H3 | rna-NM_001183821.1_PE2H3 | cds-NP_015318.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:524529-526295:- | gene-YPL007C_PE2H4 | rna-NM_001183821.1_PE2H4 | cds-NP_015318.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:542082-543848:- | gene-YPL007C_S288C | rna-NM_001183821.1_S288C | cds-NP_015318.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000076.1:38823-40589:- | gene-YPL007C_SA1 | rna-NM_001183821.1_SA1 | cds-NP_015318.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:519591-521357:- | gene-YPL007C_ThermosaccDry | rna-NM_001183821.1_ThermosaccDry | cds-NP_015318.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:534989-536755:- | gene-YPL007C_VR1 | rna-NM_001183821.1_VR1 | cds-NP_015318.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:518897-520663:- | gene-YPL007C_ZTW1 | rna-NM_001183821.1_ZTW1 | cds-NP_015318.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:518737-520503:- | gene-YPL007C_Sparadoxus | rna-NM_001183821.1_Sparadoxus | cds-NP_015318.1_Sparadoxus | 88.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |