Gene name: TFC7
Reference locus (S288C): YOR110W
Gene biotype: protein_coding
Description: RNA pol III transcription initiation factor complex (TFIIIC) subunit; part of the TauA globular domain of TFIIIC that binds DNA at the BoxA promoter sites of tRNA and similar genes; TFC7 has a paralog, YNL108C, that arose from the whole genome duplication
Top 10 interactors (score): TFC1 (0.999); TFC4 (0.999); TFC8 (0.998); TFC6 (0.998); TFC3 (0.998); SPT15 (0.953); BRF1 (0.923); BDP1 (0.905); PML39 (0.872); URA4 (0.868); YGR109W-B (0.749); CST6 (0.746); URA2 (0.741); SIR3 (0.733); ESA1 (0.702); NHP6B (0.671); TFG2 (0.621); RPC10 (0.612); RNH1 (0.611); CDC39 (0.602)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:512994-514301:+ | gene-YOR110W_AKU4011 | rna-NM_001183529.1_AKU4011 | cds-NP_014753.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:64760-66067:- | gene-YOR110W_BG1 | rna-NM_001183529.1_BG1 | cds-NP_014753.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:516583-517890:+ | gene-YOR110W_Bruggeman | rna-NM_001183529.1_Bruggeman | cds-NP_014753.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:516572-517879:+ | gene-YOR110W_CAT1 | rna-NM_001183529.1_CAT1 | cds-NP_014753.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:508533-509840:+ | gene-YOR110W_CBS1585 | rna-NM_001183529.1_CBS1585 | cds-NP_014753.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:513308-514615:+ | gene-YOR110W_CBS436 | rna-NM_001183529.1_CBS436 | cds-NP_014753.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:507045-508352:+ | gene-YOR110W_CBS6412 | rna-NM_001183529.1_CBS6412 | cds-NP_014753.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:514342-515649:+ | gene-YOR110W_CBS6413 | rna-NM_001183529.1_CBS6413 | cds-NP_014753.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:529021-530328:+ | gene-YOR110W_CENPK1137D | rna-NM_001183529.1_CENPK1137D | cds-NP_014753.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:509545-510852:+ | gene-YOR110W_EthanolRed | rna-NM_001183529.1_EthanolRed | cds-NP_014753.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:513047-514354:+ | gene-YOR110W_FaliES1 | rna-NM_001183529.1_FaliES1 | cds-NP_014753.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000063.1:44889-46196:- | gene-YOR110W_JAY291 | rna-NM_001183529.1_JAY291 | cds-NP_014753.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:521141-522448:+ | gene-YOR110W_MUCL30387 | rna-NM_001183529.1_MUCL30387 | cds-NP_014753.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:526319-527626:+ | gene-YOR110W_MUCL30388 | rna-NM_001183529.1_MUCL30388 | cds-NP_014753.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:515932-517239:+ | gene-YOR110W_MUCL39482 | rna-NM_001183529.1_MUCL39482 | cds-NP_014753.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:532032-533339:+ | gene-YOR110W_MUCL42920 | rna-NM_001183529.1_MUCL42920 | cds-NP_014753.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:528830-530137:+ | gene-YOR110W_NCIM3186 | rna-NM_001183529.1_NCIM3186 | cds-NP_014753.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:522402-523709:+ | gene-YOR110W_NCYC1407 | rna-NM_001183529.1_NCYC1407 | cds-NP_014753.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:521400-522707:+ | gene-YOR110W_PE2H3 | rna-NM_001183529.1_PE2H3 | cds-NP_014753.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:531777-533084:+ | gene-YOR110W_PE2H4 | rna-NM_001183529.1_PE2H4 | cds-NP_014753.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:528941-530248:+ | gene-YOR110W_S288C | rna-NM_001183529.1_S288C | cds-NP_014753.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000034.1:58465-59772:+ | gene-YOR110W_SA1 | rna-NM_001183529.1_SA1 | cds-NP_014753.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:512207-513514:+ | gene-YOR110W_ThermosaccDry | rna-NM_001183529.1_ThermosaccDry | cds-NP_014753.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:514327-515634:+ | gene-YOR110W_VR1 | rna-NM_001183529.1_VR1 | cds-NP_014753.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:246195-247502:+ | gene-YOR110W_ZTW1 | rna-NM_001183529.1_ZTW1 | cds-NP_014753.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:518240-519550:+ | gene-YOR110W_Sparadoxus | rna-NM_001183529.1_Sparadoxus | cds-NP_014753.1_Sparadoxus | 89.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |