Gene name: TFC6
Reference locus (S288C): YDR362C
Gene biotype: protein_coding
Description: Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of TFIIIC TauB domain that binds BoxB promoter sites of tRNA and other genes; cooperates with Tfc3p in DNA binding; human homolog is TFIIIC-110
Top 10 interactors (score): TFC4 (0.999); TFC8 (0.999); TFC1 (0.999); TFC3 (0.999); TFC7 (0.998); SPT15 (0.981); BDP1 (0.98); BRF1 (0.975); RET1 (0.93); RPC31 (0.916); RPO31 (0.905); RPC53 (0.899); RPC82 (0.83); RPC34 (0.799); RPC11 (0.792); RPC10 (0.775); YER137C (0.745); RPC25 (0.723); RPC17 (0.722); RPB8 (0.712)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1142741-1144759:- | gene-YDR362C_AKU4011 | rna-NM_001180670.1_AKU4011 | cds-NP_010649.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:21292-23310:- | gene-YDR362C_BG1 | rna-NM_001180670.1_BG1 | cds-NP_010649.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1173396-1175414:- | gene-YDR362C_Bruggeman | rna-NM_001180670.1_Bruggeman | cds-NP_010649.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1151986-1154004:- | gene-YDR362C_CAT1 | rna-NM_001180670.1_CAT1 | cds-NP_010649.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1137458-1139476:- | gene-YDR362C_CBS1585 | rna-NM_001180670.1_CBS1585 | cds-NP_010649.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1156042-1158060:- | gene-YDR362C_CBS436 | rna-NM_001180670.1_CBS436 | cds-NP_010649.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1133718-1135736:- | gene-YDR362C_CBS6412 | rna-NM_001180670.1_CBS6412 | cds-NP_010649.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1155608-1157626:- | gene-YDR362C_CBS6413 | rna-NM_001180670.1_CBS6413 | cds-NP_010649.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1195324-1197342:- | gene-YDR362C_CENPK1137D | rna-NM_001180670.1_CENPK1137D | cds-NP_010649.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1147146-1149164:- | gene-YDR362C_EthanolRed | rna-NM_001180670.1_EthanolRed | cds-NP_010649.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1150429-1152447:- | gene-YDR362C_FaliES1 | rna-NM_001180670.1_FaliES1 | cds-NP_010649.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000057.1:38626-40644:+ | gene-YDR362C_JAY291 | rna-NM_001180670.1_JAY291 | cds-NP_010649.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1156694-1158712:- | gene-YDR362C_MUCL30387 | rna-NM_001180670.1_MUCL30387 | cds-NP_010649.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1139301-1141319:- | gene-YDR362C_MUCL30388 | rna-NM_001180670.1_MUCL30388 | cds-NP_010649.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1128992-1131010:- | gene-YDR362C_MUCL39482 | rna-NM_001180670.1_MUCL39482 | cds-NP_010649.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1070928-1072946:- | gene-YDR362C_MUCL42920 | rna-NM_001180670.1_MUCL42920 | cds-NP_010649.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1196602-1198620:- | gene-YDR362C_NCIM3186 | rna-NM_001180670.1_NCIM3186 | cds-NP_010649.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1142664-1144682:- | gene-YDR362C_NCYC1407 | rna-NM_001180670.1_NCYC1407 | cds-NP_010649.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1153095-1155113:- | gene-YDR362C_PE2H3 | rna-NM_001180670.1_PE2H3 | cds-NP_010649.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1158680-1160698:- | gene-YDR362C_PE2H4 | rna-NM_001180670.1_PE2H4 | cds-NP_010649.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1196679-1198697:- | gene-YDR362C_S288C | rna-NM_001180670.1_S288C | cds-NP_010649.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000072.1:21373-23391:- | gene-YDR362C_SA1 | rna-NM_001180670.1_SA1 | cds-NP_010649.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1154710-1156728:- | gene-YDR362C_ThermosaccDry | rna-NM_001180670.1_ThermosaccDry | cds-NP_010649.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:582059-584077:- | gene-YDR362C_VR1 | rna-NM_001180670.1_VR1 | cds-NP_010649.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:197543-199561:- | gene-YDR362C_ZTW1 | rna-NM_001180670.1_ZTW1 | cds-NP_010649.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1148582-1150588:- | gene-YDR362C_Sparadoxus | rna-NM_001180670.1_Sparadoxus | cds-NP_010649.1_Sparadoxus | 87.6 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |