Gene name: TED1
Reference locus (S288C): YIL039W
Gene biotype: protein_coding
Description: Protein TED1; GPI-glycan remodelase; conserved phosphoesterase domain-containing protein; acts together with Emp24p/Erv25p in cargo exit from the ER; functional ortholog of mammalian GPI-glycan remodelase PGAP5; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO)
Top 10 interactors (score): CWH43 (0.905); ERV25 (0.884); CDC1 (0.849); EMP24 (0.838); COY1 (0.783); YCR061W (0.783); GPI13 (0.75); MNL2 (0.749); OSM1 (0.719); CWP2 (0.705); BST1 (0.701); GPI10 (0.7); MAN2 (0.694); GVP36 (0.691); BSC6 (0.669); ROT1 (0.664); KRE6 (0.659); TMS1 (0.65); MCD4 (0.639); MRPL28 (0.632)
Homologues (species, bitscore): mppe1 (Xenopus tropicalis, 50.8); AT1G53710 (Arabidopsis thaliana, 59.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:275254-276675:+ | gene-YIL039W_AKU4011 | rna-NM_001179389.1_AKU4011 | cds-NP_012225.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:136693-138114:+ | gene-YIL039W_BG1 | rna-NM_001179389.1_BG1 | cds-NP_012225.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:281523-282944:+ | gene-YIL039W_Bruggeman | rna-NM_001179389.1_Bruggeman | cds-NP_012225.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:269427-270848:+ | gene-YIL039W_CAT1 | rna-NM_001179389.1_CAT1 | cds-NP_012225.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:275081-276502:+ | gene-YIL039W_CBS1585 | rna-NM_001179389.1_CBS1585 | cds-NP_012225.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:270401-271822:+ | gene-YIL039W_CBS436 | rna-NM_001179389.1_CBS436 | cds-NP_012225.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:271694-273115:+ | gene-YIL039W_CBS6412 | rna-NM_001179389.1_CBS6412 | cds-NP_012225.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:267245-268666:+ | gene-YIL039W_CBS6413 | rna-NM_001179389.1_CBS6413 | cds-NP_012225.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:270339-271760:+ | gene-YIL039W_CENPK1137D | rna-NM_001179389.1_CENPK1137D | cds-NP_012225.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:259168-260589:+ | gene-YIL039W_EthanolRed | rna-NM_001179389.1_EthanolRed | cds-NP_012225.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:276707-278128:+ | gene-YIL039W_FaliES1 | rna-NM_001179389.1_FaliES1 | cds-NP_012225.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:20740-22161:- | gene-YIL039W_JAY291 | rna-NM_001179389.1_JAY291 | cds-NP_012225.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:278373-279794:+ | gene-YIL039W_MUCL30387 | rna-NM_001179389.1_MUCL30387 | cds-NP_012225.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:274976-276397:+ | gene-YIL039W_MUCL30388 | rna-NM_001179389.1_MUCL30388 | cds-NP_012225.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:275922-277343:+ | gene-YIL039W_MUCL39482 | rna-NM_001179389.1_MUCL39482 | cds-NP_012225.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:279066-280487:+ | gene-YIL039W_MUCL42920 | rna-NM_001179389.1_MUCL42920 | cds-NP_012225.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:278426-279847:+ | gene-YIL039W_NCIM3186 | rna-NM_001179389.1_NCIM3186 | cds-NP_012225.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:280195-281616:+ | gene-YIL039W_NCYC1407 | rna-NM_001179389.1_NCYC1407 | cds-NP_012225.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:273455-274876:+ | gene-YIL039W_PE2H3 | rna-NM_001179389.1_PE2H3 | cds-NP_012225.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:268161-269582:+ | gene-YIL039W_PE2H4 | rna-NM_001179389.1_PE2H4 | cds-NP_012225.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:278426-279847:+ | gene-YIL039W_S288C | rna-NM_001179389.1_S288C | cds-NP_012225.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:46311-47732:- | gene-YIL039W_SA1 | rna-NM_001179389.1_SA1 | cds-NP_012225.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:275376-276797:+ | gene-YIL039W_ThermosaccDry | rna-NM_001179389.1_ThermosaccDry | cds-NP_012225.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:272563-273984:+ | gene-YIL039W_VR1 | rna-NM_001179389.1_VR1 | cds-NP_012225.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:249230-250651:+ | gene-YIL039W_ZTW1 | rna-NM_001179389.1_ZTW1 | cds-NP_012225.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:271315-272736:+ | gene-YIL039W_Sparadoxus | rna-NM_001179389.1_Sparadoxus | cds-NP_012225.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |