Gene name: TDA8
Reference locus (S288C): YAL064C-A
Gene biotype: protein_coding
Description: Topoisomerase I damage affected protein 8; Putative protein of unknown function; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene
Top 10 interactors (score): YOR032W-A (0.452); YLR152C (0.424)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:4493-4875:- | gene-YAL064C-A_BG1 | rna-NM_001180041.1_BG1 | cds-NP_058136.1_BG1 | 81.4 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000169.1:10954-11336:+ | gene-YAL064C-A_Bruggeman | rna-NM_001180041.1_Bruggeman | cds-NP_058136.1_Bruggeman | 87.2 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:539987-540366:+ | gene-YAL064C-A_CAT1 | rna-NM_001180041.1_CAT1 | cds-NP_058136.1_CAT1 | 97.3 | 99.2 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:524246-524633:+ | gene-YAL064C-A_CBS436 | rna-NM_001180041.1_CBS436 | cds-NP_058136.1_CBS436 | 80.2 | 98.4 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:23584-23966:- | gene-YAL064C-A_CBS6413 | rna-NM_001180041.1_CBS6413 | cds-NP_058136.1_CBS6413 | 89.8 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:13728-14110:- | gene-YAL064C-A_EthanolRed | rna-NM_001180041.1_EthanolRed | cds-NP_058136.1_EthanolRed | 89.8 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:27671-28053:- | gene-YAL064C-A_FaliES1 | rna-NM_001180041.1_FaliES1 | cds-NP_058136.1_FaliES1 | 89.8 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000271.1:10714-10943:+ | gene-YAL064C-A_JAY291 | rna-NM_001180041.1_JAY291 | cds-NP_058136.1_JAY291 | 54.8 | 60.3 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:536564-536942:+ | gene-YAL064C-A_MUCL30387 | rna-NM_001180041.1_MUCL30387 | cds-NP_058136.1_MUCL30387 | 81.7 | 98.9 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:535290-535672:+ | gene-YAL064C-A_MUCL30388 | rna-NM_001180041.1_MUCL30388 | cds-NP_058136.1_MUCL30388 | 87.2 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:24119-24501:- | gene-YAL064C-A_MUCL39482 | rna-NM_001180041.1_MUCL39482 | cds-NP_058136.1_MUCL39482 | 89.8 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000348.1:1344-1726:- | gene-YAL064C-A_MUCL42920 | rna-NM_001180041.1_MUCL42920 | cds-NP_058136.1_MUCL42920 | 84.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:218426-218808:+ | gene-YAL064C-A_NCIM3186 | rna-NM_001180041.1_NCIM3186 | cds-NP_058136.1_NCIM3186 | 87.2 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:13363-13743:- | gene-YAL064C-A_S288C | rna-NM_001180041.1_S288C | cds-NP_058136.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000084.1:1761-2143:- | gene-YAL064C-A_SA1 | rna-NM_001180041.1_SA1 | cds-NP_058136.1_SA1 | 89.8 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:27880-28262:- | gene-YAL064C-A_ThermosaccDry | rna-NM_001180041.1_ThermosaccDry | cds-NP_058136.1_ThermosaccDry | 89.8 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:527251-527633:+ | gene-YAL064C-A_VR1 | rna-NM_001180041.1_VR1 | cds-NP_058136.1_VR1 | 86.4 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:192085-192467:+ | gene-YAL064C-A_ZTW1 | rna-NM_001180041.1_ZTW1 | cds-NP_058136.1_ZTW1 | 97.9 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:215247-215628:+ | gene-YAL064C-A_Sparadoxus | rna-NM_001180041.1_Sparadoxus | cds-NP_058136.1_Sparadoxus | 84.0 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |