Gene name: TCM62
Reference locus (S288C): YBR044C
Gene biotype: protein_coding
Description: Mitochondrial chaperone TCM62; Protein involved in assembly of the succinate dehydrogenase complex; mitochondrial; putative chaperone
Top 10 interactors (score): HSP10 (0.998); KAR2 (0.97); ISC1 (0.963); RSE1 (0.961); SMD2 (0.961); SMX3 (0.96); HSH155 (0.96); HSP82 (0.955); HSC82 (0.955); CCT4 (0.936); SDH5 (0.893); SSC1 (0.89); SSQ1 (0.89); ECM10 (0.89); SDH3 (0.877); SDH1 (0.851); PRP9 (0.848); SME1 (0.829); PRP43 (0.828); HSP60 (0.823)
Homologues (species, bitscore): HSPD1 (Homo sapiens, 60.5); Hspd1 (Mus musculus, 63.2); hspd1 (Danio rerio, 73.9); hspd1 (Xenopus tropicalis, 60.8); Hsp60C (Drosophila melanogaster, 72.0); hsp-60 (Caenorhabditis elegans, 56.6); HSP60 (Arabidopsis thaliana, 57.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:306772-308490:- | gene-YBR044C_AKU4011 | rna-NM_001178392.2_AKU4011 | cds-NP_009600.2_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:296935-298653:- | gene-YBR044C_BG1 | rna-NM_001178392.2_BG1 | cds-NP_009600.2_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:307504-309222:- | gene-YBR044C_Bruggeman | rna-NM_001178392.2_Bruggeman | cds-NP_009600.2_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:311195-312913:- | gene-YBR044C_CAT1 | rna-NM_001178392.2_CAT1 | cds-NP_009600.2_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:299069-300787:- | gene-YBR044C_CBS1585 | rna-NM_001178392.2_CBS1585 | cds-NP_009600.2_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:307075-308793:- | gene-YBR044C_CBS436 | rna-NM_001178392.2_CBS436 | cds-NP_009600.2_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:396952-398670:- | gene-YBR044C_CBS6412 | rna-NM_001178392.2_CBS6412 | cds-NP_009600.2_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:304186-305904:- | gene-YBR044C_CBS6413 | rna-NM_001178392.2_CBS6413 | cds-NP_009600.2_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:318101-319819:- | gene-YBR044C_CENPK1137D | rna-NM_001178392.2_CENPK1137D | cds-NP_009600.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:433546-435264:- | gene-YBR044C_EthanolRed | rna-NM_001178392.2_EthanolRed | cds-NP_009600.2_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:322399-324117:- | gene-YBR044C_FaliES1 | rna-NM_001178392.2_FaliES1 | cds-NP_009600.2_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000441.1:7604-9322:+ | gene-YBR044C_JAY291 | rna-NM_001178392.2_JAY291 | cds-NP_009600.2_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:309132-310850:- | gene-YBR044C_MUCL30387 | rna-NM_001178392.2_MUCL30387 | cds-NP_009600.2_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:308914-310632:- | gene-YBR044C_MUCL30388 | rna-NM_001178392.2_MUCL30388 | cds-NP_009600.2_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:299057-300775:- | gene-YBR044C_MUCL39482 | rna-NM_001178392.2_MUCL39482 | cds-NP_009600.2_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:306255-307973:- | gene-YBR044C_MUCL42920 | rna-NM_001178392.2_MUCL42920 | cds-NP_009600.2_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:324138-325856:- | gene-YBR044C_NCIM3186 | rna-NM_001178392.2_NCIM3186 | cds-NP_009600.2_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:299969-301687:- | gene-YBR044C_NCYC1407 | rna-NM_001178392.2_NCYC1407 | cds-NP_009600.2_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:312141-313859:- | gene-YBR044C_PE2H3 | rna-NM_001178392.2_PE2H3 | cds-NP_009600.2_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:309817-311535:- | gene-YBR044C_PE2H4 | rna-NM_001178392.2_PE2H4 | cds-NP_009600.2_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:324341-326059:- | gene-YBR044C_S288C | rna-NM_001178392.2_S288C | cds-NP_009600.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:151484-153202:+ | gene-YBR044C_SA1 | rna-NM_001178392.2_SA1 | cds-NP_009600.2_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:321837-323555:- | gene-YBR044C_ThermosaccDry | rna-NM_001178392.2_ThermosaccDry | cds-NP_009600.2_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:303494-305212:- | gene-YBR044C_VR1 | rna-NM_001178392.2_VR1 | cds-NP_009600.2_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:297567-299285:- | gene-YBR044C_ZTW1 | rna-NM_001178392.2_ZTW1 | cds-NP_009600.2_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:333756-335478:- | gene-YBR044C_Sparadoxus | rna-NM_001178392.2_Sparadoxus | cds-NP_009600.2_Sparadoxus | 87.2 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |