Gene name: TBF1
Reference locus (S288C): YPL128C
Gene biotype: protein_coding
Description: Protein TBF1; Telobox-containing general regulatory factor; binds TTAGGG repeats within subtelomeric anti-silencing regions (STARs), blocking silent chromatin propagation; binds majority of snoRNA gene promoters, required for full snoRNA expression; caps DSB flanked by long T2AG3 repeats and blocks checkpoint activation
Top 10 interactors (score): VID22 (0.988); ENV11 (0.961); RAP1 (0.928); IFH1 (0.917); ABF1 (0.907); YMR090W (0.87); REB1 (0.868); CDC13 (0.851); STN1 (0.835); RIF2 (0.832); MCM1 (0.822); YBL109W (0.788); HMO1 (0.787); YDR544C (0.784); YJR162C (0.78); YMR326C (0.78); YRF1-8 (0.78); YOL166W-A (0.78); YCR108C (0.78); YKL225W (0.78)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:284186-285874:- | gene-YPL128C_AKU4011 | rna-NM_001183942.1_AKU4011 | cds-NP_015197.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:489873-491561:- | gene-YPL128C_BG1 | rna-NM_001183942.1_BG1 | cds-NP_015197.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:310185-311873:- | gene-YPL128C_Bruggeman | rna-NM_001183942.1_Bruggeman | cds-NP_015197.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:306856-308544:- | gene-YPL128C_CAT1 | rna-NM_001183942.1_CAT1 | cds-NP_015197.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:288259-289947:- | gene-YPL128C_CBS1585 | rna-NM_001183942.1_CBS1585 | cds-NP_015197.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:302923-304611:- | gene-YPL128C_CBS436 | rna-NM_001183942.1_CBS436 | cds-NP_015197.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:292928-294616:- | gene-YPL128C_CBS6412 | rna-NM_001183942.1_CBS6412 | cds-NP_015197.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:284895-286583:- | gene-YPL128C_CBS6413 | rna-NM_001183942.1_CBS6413 | cds-NP_015197.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:306435-308123:- | gene-YPL128C_CENPK1137D | rna-NM_001183942.1_CENPK1137D | cds-NP_015197.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:282874-284562:- | gene-YPL128C_EthanolRed | rna-NM_001183942.1_EthanolRed | cds-NP_015197.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:290466-292154:- | gene-YPL128C_FaliES1 | rna-NM_001183942.1_FaliES1 | cds-NP_015197.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000007.1:73694-75382:+ | gene-YPL128C_JAY291 | rna-NM_001183942.1_JAY291 | cds-NP_015197.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:301429-303117:- | gene-YPL128C_MUCL30387 | rna-NM_001183942.1_MUCL30387 | cds-NP_015197.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:299438-301126:- | gene-YPL128C_MUCL30388 | rna-NM_001183942.1_MUCL30388 | cds-NP_015197.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:281588-283276:- | gene-YPL128C_MUCL39482 | rna-NM_001183942.1_MUCL39482 | cds-NP_015197.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:338826-340514:- | gene-YPL128C_MUCL42920 | rna-NM_001183942.1_MUCL42920 | cds-NP_015197.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:306516-308204:- | gene-YPL128C_NCIM3186 | rna-NM_001183942.1_NCIM3186 | cds-NP_015197.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:288041-289729:- | gene-YPL128C_NCYC1407 | rna-NM_001183942.1_NCYC1407 | cds-NP_015197.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:295499-297187:- | gene-YPL128C_PE2H3 | rna-NM_001183942.1_PE2H3 | cds-NP_015197.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:295122-296810:- | gene-YPL128C_PE2H4 | rna-NM_001183942.1_PE2H4 | cds-NP_015197.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:306533-308221:- | gene-YPL128C_S288C | rna-NM_001183942.1_S288C | cds-NP_015197.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000012.1:65459-67147:+ | gene-YPL128C_SA1 | rna-NM_001183942.1_SA1 | cds-NP_015197.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:290264-291952:- | gene-YPL128C_ThermosaccDry | rna-NM_001183942.1_ThermosaccDry | cds-NP_015197.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:305242-306930:- | gene-YPL128C_VR1 | rna-NM_001183942.1_VR1 | cds-NP_015197.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:289589-291277:- | gene-YPL128C_ZTW1 | rna-NM_001183942.1_ZTW1 | cds-NP_015197.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:291306-292994:- | gene-YPL128C_Sparadoxus | rna-NM_001183942.1_Sparadoxus | cds-NP_015197.1_Sparadoxus | 91.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |