Gene name: TAX4
Reference locus (S288C): YJL083W
Gene biotype: protein_coding
Description: Protein TAX4; EH domain-containing protein; involved in regulating phosphatidylinositol 4,5-bisphosphate levels and autophagy; Irs4p and Tax4p bind and activate the PtdIns phosphatase Inp51p; Irs4p and Tax4p are involved in localizing Atg17p to the PAS; TAX4 has a paralog, IRS4, that arose from the whole genome duplication
Top 10 interactors (score): INP51 (0.98); APL3 (0.924); SEC4 (0.789); SLG1 (0.78); YAP1801 (0.772); APM4 (0.77); VPS27 (0.73); IRS4 (0.727); VPS51 (0.711); RVS167 (0.67); YAP1802 (0.667); ENT1 (0.665); ENT3 (0.663); HOF1 (0.659); CHC1 (0.658); VPS1 (0.654); MGM1 (0.654); DNM1 (0.654); APL4 (0.651); ENT4 (0.639)
Homologues (species, bitscore): eps15l1a (Danio rerio, 50.8); Eps-15 (Drosophila melanogaster, 50.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:261556-263370:+ | gene-YJL083W_AKU4011 | rna-NM_001181516.1_AKU4011 | cds-NP_012452.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:351084-352898:- | gene-YJL083W_BG1 | rna-NM_001181516.1_BG1 | cds-NP_012452.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:273001-274815:+ | gene-YJL083W_Bruggeman | rna-NM_001181516.1_Bruggeman | cds-NP_012452.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:277896-279710:+ | gene-YJL083W_CAT1 | rna-NM_001181516.1_CAT1 | cds-NP_012452.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:273217-275031:+ | gene-YJL083W_CBS1585 | rna-NM_001181516.1_CBS1585 | cds-NP_012452.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:291331-293145:+ | gene-YJL083W_CBS436 | rna-NM_001181516.1_CBS436 | cds-NP_012452.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:262314-264128:+ | gene-YJL083W_CBS6412 | rna-NM_001181516.1_CBS6412 | cds-NP_012452.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:263669-265483:+ | gene-YJL083W_CBS6413 | rna-NM_001181516.1_CBS6413 | cds-NP_012452.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:261304-263118:+ | gene-YJL083W_CENPK1137D | rna-NM_001181516.1_CENPK1137D | cds-NP_012452.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:265405-267219:+ | gene-YJL083W_EthanolRed | rna-NM_001181516.1_EthanolRed | cds-NP_012452.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:276979-278793:+ | gene-YJL083W_FaliES1 | rna-NM_001181516.1_FaliES1 | cds-NP_012452.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:74602-76416:+ | gene-YJL083W_JAY291 | rna-NM_001181516.1_JAY291 | cds-NP_012452.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:275271-277085:+ | gene-YJL083W_MUCL30387 | rna-NM_001181516.1_MUCL30387 | cds-NP_012452.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:271348-273162:+ | gene-YJL083W_MUCL30388 | rna-NM_001181516.1_MUCL30388 | cds-NP_012452.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:265974-267788:+ | gene-YJL083W_MUCL39482 | rna-NM_001181516.1_MUCL39482 | cds-NP_012452.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:272179-273993:+ | gene-YJL083W_MUCL42920 | rna-NM_001181516.1_MUCL42920 | cds-NP_012452.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:278820-280634:+ | gene-YJL083W_NCIM3186 | rna-NM_001181516.1_NCIM3186 | cds-NP_012452.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:264662-266476:+ | gene-YJL083W_NCYC1407 | rna-NM_001181516.1_NCYC1407 | cds-NP_012452.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:277028-278842:+ | gene-YJL083W_PE2H3 | rna-NM_001181516.1_PE2H3 | cds-NP_012452.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:276672-278486:+ | gene-YJL083W_PE2H4 | rna-NM_001181516.1_PE2H4 | cds-NP_012452.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:278841-280655:+ | gene-YJL083W_S288C | rna-NM_001181516.1_S288C | cds-NP_012452.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:74533-76347:+ | gene-YJL083W_SA1 | rna-NM_001181516.1_SA1 | cds-NP_012452.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:270392-272206:+ | gene-YJL083W_ThermosaccDry | rna-NM_001181516.1_ThermosaccDry | cds-NP_012452.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:271904-273718:+ | gene-YJL083W_VR1 | rna-NM_001181516.1_VR1 | cds-NP_012452.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:251748-253562:+ | gene-YJL083W_ZTW1 | rna-NM_001181516.1_ZTW1 | cds-NP_012452.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:275807-277630:+ | gene-YJL083W_Sparadoxus | rna-NM_001181516.1_Sparadoxus | cds-NP_012452.1_Sparadoxus | 88.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |